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  5. LOC_Os10g38960

LOC_Os10g38960 (Os10g0533800)


Aliases : Os10g0533800

Description : 30.2.99 signalling.receptor kinases.misc Encodes LecRKA4.2, a member of the lectin receptor kinase subfamily A4 (LecRKA4.1 At5g01540 LecRKA4.2 At5g01550 LecRKA4.3 At5g01560). Together with other members of the subfamily, functions redundantly in the negative regulation of ABA response in seed germination. lectin receptor kinase a4.1 (LECRKA4.2)


Gene families : OG_01_0000063 (Gene family) Phylogenetic Tree(s): OG0000063_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os10g38960
Cluster HCCA cluster: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
AT1G07460 No alias Concanavalin A-like lectin family protein 0.02 Gene family
AT3G53810 No alias Concanavalin A-like lectin protein kinase family protein 0.01 Gene family
GSVIVT01005211001 No alias 30.2.19 signalling.receptor kinases.legume-lectin... 0.03 Gene family
GSVIVT01034126001 No alias 30.2.99 signalling.receptor kinases.misc Induced in... 0.03 Gene family
LOC_Os02g19530 No alias 30.2.99 signalling.receptor kinases.misc Induced in... 0.02 Gene family
LOC_Os02g42780 Os02g0640500 30.2.99 signalling.receptor kinases.misc Induced in... 0.02 Gene family
LOC_Os04g44910 Os04g0531500 30.2.99 signalling.receptor kinases.misc Induced in... 0.02 Gene family
LOC_Os06g10790 Os06g0210400 30.2.19 signalling.receptor kinases.legume-lectin... 0.04 Gene family
LOC_Os07g03780 Os07g0129800 30.2.99 signalling.receptor kinases.misc Induced in... 0.04 Gene family
LOC_Os07g03790 Os07g0129900 30.2.99 signalling.receptor kinases.misc Induced in... 0.03 Gene family
LOC_Os07g03820 Os07g0130200 30.2.99 signalling.receptor kinases.misc Induced in... 0.02 Gene family
LOC_Os07g03830 No alias 30.2.99 signalling.receptor kinases.misc Induced in... 0.03 Gene family
LOC_Os07g03870 Os07g0130800 30.2.99 signalling.receptor kinases.misc Induced in... 0.03 Gene family
LOC_Os07g03880 No alias 30.2.99 signalling.receptor kinases.misc Induced in... 0.02 Gene family
LOC_Os07g03970 No alias 30.2.99 signalling.receptor kinases.misc Induced in... 0.02 Gene family
LOC_Os07g04010 No alias 30.2.99 signalling.receptor kinases.misc Induced in... 0.03 Gene family
LOC_Os07g18230 Os07g0283050 30.2.99 signalling.receptor kinases.misc Induced in... 0.03 Gene family
MA_10213388g0010 No alias 30.2.99 signalling.receptor kinases.misc Induced in... 0.03 Gene family
MA_10434113g0010 No alias 30.2.19 signalling.receptor kinases.legume-lectin... 0.03 Gene family
MA_10436198g0010 No alias 29.4 protein.postranslational modification Concanavalin... 0.02 Gene family
MA_107910g0010 No alias 30.2.19 signalling.receptor kinases.legume-lectin... 0.02 Gene family
MA_10908g0010 No alias 30.2.19 signalling.receptor kinases.legume-lectin... 0.01 Gene family
Solyc09g005000.1.1 Solyc09g005000.1 30.2.99 signalling.receptor kinases.misc Encodes... 0.03 Gene family
Solyc10g084860.1.1 Solyc10g084860.1 30.2.19 signalling.receptor kinases.legume-lectin... 0.02 Gene family
Zm00001d019334 GRMZM2G082830 30.2.99 signalling.receptor kinases.misc Induced in... 0.02 Gene family
Zm00001d019411 GRMZM2G438871 30.2.99 signalling.receptor kinases.misc Induced in... 0.02 Gene family
Zm00001d032868 GRMZM2G303965 30.2.99 signalling.receptor kinases.misc Induced in... 0.02 Gene family
Zm00001d032869 GRMZM2G079376,... 30.2.99 signalling.receptor kinases.misc Induced in... 0.03 Gene family
Zm00001d034217 GRMZM2G475948 30.2.99 signalling.receptor kinases.misc Induced in... 0.02 Gene family
Zm00001d037397 GRMZM2G337768 30.2.99 signalling.receptor kinases.misc Induced in... 0.03 Gene family
Zm00001d037398 GRMZM2G397889 30.2.99 signalling.receptor kinases.misc Induced in... 0.02 Gene family
Zm00001d045839 GRMZM2G400694 30.2.99 signalling.receptor kinases.misc Induced in... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0030246 carbohydrate binding IEA InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000719 Prot_kinase_dom 357 627
IPR001220 Legume_lectin_dom 30 282
No external refs found!