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  5. Solyc03g078650.4.1

Solyc03g078650.4.1 (Solyc03g078650)


Aliases : Solyc03g078650

Description : GTPase effector (BDR)


Gene families : OG0000666 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000666_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g078650.4.1
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00133p00115060 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
Als_g03158 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15973 No alias GTPase effector *(BDR) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g35641 No alias GTPase effector *(BDR) & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g09619 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0031.g024486 No alias GTPase effector *(BDR) & original description: CDS=183-1394 0.04 OrthoFinder output from all 47 species
Cba_g17398 No alias GTPase effector *(BDR) & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g37138 No alias GTPase effector *(BDR) & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g41584 No alias GTPase effector *(BDR) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g11719 No alias GTPase effector *(BDR) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01016395001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os03g07120.1 LOC_Os03g07120 GTPase effector (BDR) 0.06 OrthoFinder output from all 47 species
LOC_Os07g40150.1 LOC_Os07g40150 GTPase effector (BDR) 0.03 OrthoFinder output from all 47 species
LOC_Os12g39160.1 LOC_Os12g39160 GTPase effector (BDR) 0.04 OrthoFinder output from all 47 species
Lfl_g29419 No alias GTPase effector *(BDR) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g31231 No alias GTPase effector *(BDR) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g03053 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g11922 No alias GTPase effector *(BDR) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g12497 No alias GTPase effector *(BDR) & original description: none 0.04 OrthoFinder output from all 47 species
Solyc02g085490.2.1 Solyc02g085490 GTPase effector (BDR) 0.03 OrthoFinder output from all 47 species
Spa_g47866 No alias GTPase effector *(BDR) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g11924 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e001181_P001 Zm00001e001181 GTPase effector (BDR) 0.03 OrthoFinder output from all 47 species
Zm00001e035436_P001 Zm00001e035436 GTPase effector (BDR) 0.02 OrthoFinder output from all 47 species
Zm00001e038067_P001 Zm00001e038067 GTPase effector (BDR) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008762 UDP-N-acetylmuramate dehydrogenase activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006873 DUF620 117 367
No external refs found!