1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc03g078390.3.1

Solyc03g078390.3.1 (UBP26, SUP32,...)


Aliases : UBP26, SUP32, ATUBP26, Solyc03g078390

Description : deubiquitinase (UBP26)


Gene families : OG0005347 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005347_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g078390.3.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g085064 UBP26, SUP32, ATUBP26 deubiquitinase *(UBP26) & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g13884 UBP26, SUP32, ATUBP26 deubiquitinase *(UBP26) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g02648 UBP26, SUP32, ATUBP26 deubiquitinase *(UBP26) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g03261 UBP26, SUP32, ATUBP26 deubiquitinase *(UBP26) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g31406 UBP26, SUP32, ATUBP26 deubiquitinase *(UBP26) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g19079 UBP26, SUP32, ATUBP26 deubiquitinase *(UBP26) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene38132.t1 UBP26, SUP32,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g03407 UBP26, SUP32, ATUBP26 deubiquitinase *(UBP26) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.12G013700.1 UBP26, SUP32,... deubiquitinase *(UBP26) & original description:... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021502.2 UBP26, SUP32, ATUBP26 Protein degradation.peptidase families.cysteine-type... 0.03 OrthoFinder output from all 47 species
Cre01.g030450 UBP26, SUP32, ATUBP26 Protein degradation.peptidase families.cysteine-type... 0.02 OrthoFinder output from all 47 species
Dac_g11205 UBP26, SUP32, ATUBP26 deubiquitinase *(UBP26) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g03202 UBP26, SUP32, ATUBP26 deubiquitinase *(UBP26) & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g10699 UBP26, SUP32, ATUBP26 deubiquitinase *(UBP26) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os03g09260.1 UBP26, SUP32,... deubiquitinase (UBP26) 0.05 OrthoFinder output from all 47 species
Lfl_g28593 UBP26, SUP32, ATUBP26 deubiquitinase *(UBP26) & original description: none 0.04 OrthoFinder output from all 47 species
MA_2328g0010 UBP26, SUP32, ATUBP26 deubiquitinase (UBP26) 0.04 OrthoFinder output from all 47 species
Mp2g07570.1 UBP26, SUP32, ATUBP26 deubiquitinase (UBP6-7). deubiquitinase (UBP26) 0.04 OrthoFinder output from all 47 species
Nbi_g13018 UBP26, SUP32, ATUBP26 deubiquitinase *(UBP26) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g27293 UBP26, SUP32, ATUBP26 deubiquitinase *(UBP26) & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g09814 UBP26, SUP32, ATUBP26 deubiquitinase *(UBP26) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g07934 No alias deubiquitinase *(UBP26) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g12421 UBP26, SUP32, ATUBP26 deubiquiTinase *(UBP26) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e000813_P001 UBP26, SUP32,... deubiquitinase (UBP26) 0.08 OrthoFinder output from all 47 species
Zm00001e033878_P003 UBP26, SUP32,... deubiquitinase (UBP26) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0016579 protein deubiquitination IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
BP GO:0002097 tRNA wobble base modification IEP HCCA
BP GO:0002098 tRNA wobble uridine modification IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004197 cysteine-type endopeptidase activity IEP HCCA
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
BP GO:0010921 regulation of phosphatase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0017056 structural constituent of nuclear pore IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0019220 regulation of phosphate metabolic process IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0019902 phosphatase binding IEP HCCA
MF GO:0019903 protein phosphatase binding IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
BP GO:0031399 regulation of protein modification process IEP HCCA
BP GO:0032012 regulation of ARF protein signal transduction IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0033588 elongator holoenzyme complex IEP HCCA
BP GO:0035303 regulation of dephosphorylation IEP HCCA
BP GO:0035304 regulation of protein dephosphorylation IEP HCCA
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0046578 regulation of Ras protein signal transduction IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP HCCA
BP GO:0051174 regulation of phosphorus metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051336 regulation of hydrolase activity IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1902531 regulation of intracellular signal transduction IEP HCCA
InterPro domains Description Start Stop
IPR001394 Peptidase_C19_UCH 110 452
No external refs found!