Solyc03g071870.1.1 (ATPAL1, PAL1, Solyc03g071870)


Aliases : ATPAL1, PAL1, Solyc03g071870

Description : Phenylalanine ammonia-lyase 1 OS=Solanum tuberosum (sp|p31425|pal1_soltu : 221.0)


Gene families : OG0000270 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000270_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g071870.1.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g059368 ATPAL1, PAL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07821 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene41825.t1 PAL4, Aspi01Gene41825 EC_4.3 carbon-nitrogen lyase & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g16538 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g25081 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.01 OrthoFinder output from all 47 species
GSVIVT01024295001 ATPAL1, PAL1 Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.02 OrthoFinder output from all 47 species
Gb_01672 ATPAL2, PAL2 phenylalanine ammonia lyase (PAL) 0.02 OrthoFinder output from all 47 species
Gb_16672 ATPAL1, PAL1 phenylalanine ammonia lyase (PAL) 0.02 OrthoFinder output from all 47 species
LOC_Os05g35290.1 ATPAL1, PAL1,... phenylalanine ammonia lyase (PAL) 0.03 OrthoFinder output from all 47 species
Mp1g05190.1 ATPAL1, PAL1 phenylalanine ammonia lyase (PAL) 0.01 OrthoFinder output from all 47 species
Mp1g10150.1 PAL4 phenylalanine ammonia lyase (PAL) 0.01 OrthoFinder output from all 47 species
Mp4g14210.1 PAL4 phenylalanine ammonia lyase (PAL) 0.02 OrthoFinder output from all 47 species
Pir_g15894 ATPAL1, PAL1 EC_4.3 carbon-nitrogen lyase & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0091.g018764 ATPAL1, PAL1 EC_4.3 carbon-nitrogen lyase & original description: CDS=1-2271 0.02 OrthoFinder output from all 47 species
Smo424403 ATPAL2, PAL2 Phenylalanine ammonia-lyase OS=Citrus limon 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0009579 thylakoid IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
InterPro domains Description Start Stop
IPR001106 Aromatic_Lyase 61 140
No external refs found!