Solyc03g063390.1.1 (Solyc03g063390)

Aliases : Solyc03g063390

Description : transcription factor (mTERF)

Gene families : OG0009777 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009777_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc03g063390.1.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00029p00163040	evm_27.TU.AmTr_v1...	RNA biosynthesis.organelle...	0.05	OrthoFinder output from all 47 species
AMTR_s00029p00164640	evm_27.TU.AmTr_v1...	RNA biosynthesis.organelle...	0.03	OrthoFinder output from all 47 species
AT3G60400	No alias	Mitochondrial transcription termination factor family protein	0.03	OrthoFinder output from all 47 species
AT5G06810	No alias	Mitochondrial transcription termination factor family protein	0.05	OrthoFinder output from all 47 species
Gb_26980	No alias	transcription factor (mTERF)	0.03	OrthoFinder output from all 47 species
LOC_Os07g22670.1	LOC_Os07g22670	transcription factor (mTERF)	0.03	OrthoFinder output from all 47 species
MA_10432890g0010	No alias	transcription factor (mTERF)	0.05	OrthoFinder output from all 47 species
MA_8470g0010	No alias	transcription factor (mTERF)	0.05	OrthoFinder output from all 47 species
Zm00001e003603_P001	Zm00001e003603	transcription factor (mTERF)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003690	double-stranded DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0000723	telomere maintenance	IEP	HCCA
MF	GO:0005543	phospholipid binding	IEP	HCCA
BP	GO:0006259	DNA metabolic process	IEP	HCCA
BP	GO:0006996	organelle organization	IEP	HCCA
MF	GO:0008289	lipid binding	IEP	HCCA
BP	GO:0016043	cellular component organization	IEP	HCCA
MF	GO:0031072	heat shock protein binding	IEP	HCCA
BP	GO:0032200	telomere organization	IEP	HCCA
MF	GO:0035091	phosphatidylinositol binding	IEP	HCCA
MF	GO:0051082	unfolded protein binding	IEP	HCCA
BP	GO:0051276	chromosome organization	IEP	HCCA
BP	GO:0071840	cellular component organization or biogenesis	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003690	MTERF	258	422
IPR003690	MTERF	439	540

External Links

No external refs found!