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  5. Solyc03g062890.3.1

Solyc03g062890.3.1 (CSD3, Solyc03g062890)


Aliases : CSD3, Solyc03g062890

Description : copper/zinc superoxide dismutase


Gene families : OG0000525 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000525_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g062890.3.1
Cluster HCCA: Cluster_153

Target Alias Description ECC score Gene Family Method Actions
Ala_g06819 CZSOD2, CSD2 EC_1.15 oxidoreductase acting on superoxide as acceptor... 0.04 OrthoFinder output from all 47 species
Ceric.13G061600.1 CSD1, Ceric.13G061600 EC_1.15 oxidoreductase acting on superoxide as acceptor... 0.04 OrthoFinder output from all 47 species
Spa_g54809 CZSOD2, CSD2 EC_1.15 oxidoreductase acting on superoxide as acceptor... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006801 superoxide metabolic process IEA Interproscan
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR001424 SOD_Cu_Zn_dom 12 150
No external refs found!