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  5. Solyc03g058430.3.1

Solyc03g058430.3.1 (FAD2, Solyc03g058430)


Aliases : FAD2, Solyc03g058430

Description : omega-3/omega-6 fatty acid desaturase


Gene families : OG0001837 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001837_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g058430.3.1
Cluster HCCA: Cluster_94

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00172860 FAD2,... Lipid metabolism.fatty acid synthesis.fatty acid... 0.04 OrthoFinder output from all 47 species
Als_g50821 FAD2 delta-12/delta-15 fatty acid desaturase & original... 0.03 OrthoFinder output from all 47 species
Aob_g08312 FAD2 delta-12/delta-15 fatty acid desaturase & original... 0.03 OrthoFinder output from all 47 species
Ceric.15G005300.1 FAD2, Ceric.15G005300 delta-12/delta-15 fatty acid desaturase & original... 0.03 OrthoFinder output from all 47 species
Ehy_g22864 FAD2 delta-12/delta-15 fatty acid desaturase & original... 0.04 OrthoFinder output from all 47 species
Lfl_g26639 FAD2 delta-12/delta-15 fatty acid desaturase & original... 0.03 OrthoFinder output from all 47 species
Ore_g06325 FAD2 delta-12/delta-15 fatty acid desaturase & original... 0.03 OrthoFinder output from all 47 species
Ore_g22007 FAD2 delta-12/delta-15 fatty acid desaturase & original... 0.03 OrthoFinder output from all 47 species
Pir_g58563 FAD2 delta-12/delta-15 fatty acid desaturase & original... 0.05 OrthoFinder output from all 47 species
Solyc04g040120.1.1 FAD2, Solyc04g040120 omega-3/omega-6 fatty acid desaturase 0.04 OrthoFinder output from all 47 species
Solyc12g100230.1.1 FAD2, Solyc12g100230 omega-3/omega-6 fatty acid desaturase 0.04 OrthoFinder output from all 47 species
Solyc12g100250.3.1 FAD2, Solyc12g100250 omega-3/omega-6 fatty acid desaturase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEA Interproscan
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005092 GDP-dissociation inhibitor activity IEP HCCA
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005319 lipid transporter activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005544 calcium-dependent phospholipid binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006869 lipid transport IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0061024 membrane organization IEP HCCA
BP GO:0120009 intermembrane lipid transfer IEP HCCA
MF GO:0120013 lipid transfer activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
InterPro domains Description Start Stop
IPR005804 FA_desaturase_dom 80 339
IPR021863 FAS_N 18 60
No external refs found!