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  5. Solyc03g051960.4.1

Solyc03g051960.4.1 (MS2, FAR2, Solyc03g051960)


Aliases : MS2, FAR2, Solyc03g051960

Description : fatty acyl-CoA reductase (MS2). acyl CoA reductase


Gene families : OG0000749 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000749_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g051960.4.1
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00133p00107670 MS2, FAR2,... Cell wall.cutin and suberin.cuticular lipid... 0.1 OrthoFinder output from all 47 species
AT3G11980 MS2, FAR2 Jojoba acyl CoA reductase-related male sterility protein 0.15 OrthoFinder output from all 47 species
AT5G22420 FAR7 fatty acid reductase 7 0.03 OrthoFinder output from all 47 species
AT5G22500 FAR1 fatty acid reductase 1 0.03 OrthoFinder output from all 47 species
Adi_g108122 MS2, FAR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g108123 MS2, FAR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0003.g007737 MS2, FAR2 not classified & original description: CDS=193-2040 0.03 OrthoFinder output from all 47 species
Cba_g25010 MS2, FAR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.13G009800.1 MS2, FAR2,... not classified & original description: pacid=50635537... 0.1 OrthoFinder output from all 47 species
Dcu_g09261 MS2, FAR2 not classified & original description: none 0.1 OrthoFinder output from all 47 species
GSVIVT01013560001 MS2, FAR2 Cell wall.cutin and suberin.cuticular lipid... 0.03 OrthoFinder output from all 47 species
GSVIVT01013561001 MS2, FAR2 Cell wall.cutin and suberin.cuticular lipid... 0.03 OrthoFinder output from all 47 species
GSVIVT01013562001 MS2, FAR2 Fatty acyl-CoA reductase 2 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
GSVIVT01030325001 MS2, FAR2 Fatty acyl-CoA reductase 2 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01033433001 MS2, FAR2 Cell wall.cutin and suberin.cuticular lipid... 0.13 OrthoFinder output from all 47 species
GSVIVT01036171001 G7, CER4, FAR3 Cell wall.cutin and suberin.cuticular lipid... 0.03 OrthoFinder output from all 47 species
Gb_12942 FAR4 acyl CoA reductase 0.03 OrthoFinder output from all 47 species
Gb_18690 MS2, FAR2 fatty acyl-CoA reductase (MS2). acyl CoA reductase 0.04 OrthoFinder output from all 47 species
Gb_26611 FAR4 acyl CoA reductase 0.04 OrthoFinder output from all 47 species
Gb_33594 G7, CER4, FAR3 acyl CoA reductase 0.06 OrthoFinder output from all 47 species
Gb_38743 FAR5 acyl CoA reductase 0.03 OrthoFinder output from all 47 species
LOC_Os03g07140.1 MS2, FAR2, LOC_Os03g07140 fatty acyl-CoA reductase (MS2). acyl CoA reductase 0.14 OrthoFinder output from all 47 species
LOC_Os04g28520.1 FAR1, LOC_Os04g28520 acyl CoA reductase 0.05 OrthoFinder output from all 47 species
LOC_Os04g28620.1 FAR1, LOC_Os04g28620 acyl CoA reductase 0.05 OrthoFinder output from all 47 species
LOC_Os07g23340.1 FAR1, LOC_Os07g23340 Fatty acyl-CoA reductase 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os07g23380.1 LOC_Os07g23380 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g23229 MS2, FAR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10122399g0010 FAR4 acyl CoA reductase 0.03 OrthoFinder output from all 47 species
MA_10428856g0010 G7, CER4, FAR3 Probable fatty acyl-CoA reductase 4 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_10431907g0010 G7, CER4, FAR3 acyl CoA reductase 0.07 OrthoFinder output from all 47 species
MA_10433039g0030 FAR4 Probable fatty acyl-CoA reductase 4 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_125473g0010 MS2, FAR2 Fatty acyl-CoA reductase 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_182956g0010 MS2, FAR2 acyl CoA reductase 0.02 OrthoFinder output from all 47 species
MA_30599g0010 FAR4 Probable fatty acyl-CoA reductase 4 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_428306g0010 MS2, FAR2 acyl CoA reductase 0.04 OrthoFinder output from all 47 species
MA_438940g0010 G7, CER4, FAR3 Probable fatty acyl-CoA reductase 4 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_59202g0010 MS2, FAR2 Fatty acyl-CoA reductase 2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_95531g0010 MS2, FAR2 acyl CoA reductase 0.03 OrthoFinder output from all 47 species
MA_9850928g0010 MS2, FAR2 Fatty acyl-CoA reductase 2 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Nbi_g35170 FAR6 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g42363 MS2, FAR2 not classified & original description: none 0.09 OrthoFinder output from all 47 species
Ore_g42364 MS2, FAR2 not classified & original description: none 0.09 OrthoFinder output from all 47 species
Pir_g26243 G7, CER4, FAR3 fatty acyl CoA reductase *(FAR) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g35983 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo270198 MS2, FAR2 Cell wall.cutin and suberin.cuticular lipid... 0.02 OrthoFinder output from all 47 species
Smo80322 MS2, FAR2 Cell wall.cutin and suberin.cuticular lipid... 0.02 OrthoFinder output from all 47 species
Solyc06g074410.4.1 FAR4, Solyc06g074410 acyl CoA reductase 0.03 OrthoFinder output from all 47 species
Solyc11g067170.3.1 FAR1, Solyc11g067170 acyl CoA reductase 0.03 OrthoFinder output from all 47 species
Solyc11g067180.2.1 G7, CER4, FAR3,... acyl CoA reductase 0.03 OrthoFinder output from all 47 species
Zm00001e022068_P003 FAR1, Zm00001e022068 acyl CoA reductase 0.03 OrthoFinder output from all 47 species
Zm00001e024547_P004 FAR1, Zm00001e024547 acyl CoA reductase 0.05 OrthoFinder output from all 47 species
Zm00001e033615_P003 FAR1, Zm00001e033615 acyl CoA reductase 0.02 OrthoFinder output from all 47 species
Zm00001e038924_P001 MS2, FAR2, Zm00001e038924 acyl CoA reductase 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR033640 FAR_C 508 579
IPR013120 Far_NAD-bd 101 406
No external refs found!