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  5. Solyc03g037490.1.1

Solyc03g037490.1.1 (Solyc03g037490)


Aliases : Solyc03g037490

Description : SINA-class E3 ligase


Gene families : OG0000462 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000462_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g037490.1.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00177540 SINAT2,... Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Aspi01Gene11045.t1 Aspi01Gene11045 E3 ubiquitin ligase *(SINA) & original description: none 0.03 OrthoFinder output from all 47 species
MA_79290g0010 No alias SINA-class E3 ligase 0.03 OrthoFinder output from all 47 species
Smo405881 No alias No description available 0.02 OrthoFinder output from all 47 species
Zm00001e016376_P001 Zm00001e016376 SINA-class E3 ligase 0.02 OrthoFinder output from all 47 species
Zm00001e035769_P001 Zm00001e035769 SINA-class E3 ligase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA

No InterPro domains available for this sequence

No external refs found!