Solyc03g034120.3.1 (ATHB40, HB40, HB-5,...)

Aliases : ATHB40, HB40, HB-5, Solyc03g034120

Description : transcription factor (HD-ZIP I/II)

Gene families : OG0000129 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000129_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc03g034120.3.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00006p00267430	ATHB1, ATHB-1,...	RNA biosynthesis.transcriptional activation.HB...	0.02	OrthoFinder output from all 47 species
AMTR_s00008p00214750	HB6, ATHB6,...	RNA biosynthesis.transcriptional activation.HB...	0.06	OrthoFinder output from all 47 species
AMTR_s00059p00141510	ATHB40, HB40,...	RNA biosynthesis.transcriptional activation.HB...	0.02	OrthoFinder output from all 47 species
AT2G46680	HB-7, ATHB-7, ATHB7	homeobox 7	0.01	OrthoFinder output from all 47 species
AT3G61890	HB-12, ATHB-12, ATHB12	homeobox 12	0.02	OrthoFinder output from all 47 species
Adi_g014408	ATHB5, ATHB-5, HB5	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Aev_g25617	ATHB1, ATHB-1,...	regulatory protein *(LMI1) of floral meristem identity...	0.02	OrthoFinder output from all 47 species
Ala_g33628	ATHB3, HB-3, ATHB-3, HAT7	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Aob_g11711	HB51, ATHB51, LMI1	HD-ZIP I/II-type transcription factor & original...	0.06	OrthoFinder output from all 47 species
Aspi01Gene06221.t1	ATHB40, HB40,...	HD-ZIP I/II-type transcription factor & original...	0.01	OrthoFinder output from all 47 species
Aspi01Gene32029.t1	ATHB5, ATHB-5,...	HD-ZIP I/II-type transcription factor & original...	0.01	OrthoFinder output from all 47 species
Aspi01Gene35463.t1	ATHB3, HB-3,...	regulatory protein *(LMI1) of floral meristem identity...	0.01	OrthoFinder output from all 47 species
Aspi01Gene49447.t1	ATHB13, Aspi01Gene49447	HD-ZIP I/II-type transcription factor & original...	0.01	OrthoFinder output from all 47 species
Aspi01Gene53135.t1	ATHB3, HB-3,...	HD-ZIP I/II-type transcription factor & original...	0.01	OrthoFinder output from all 47 species
Aspi01Gene60040.t1	ATHB3, HB-3,...	HD-ZIP I/II-type transcription factor & original...	0.04	OrthoFinder output from all 47 species
Aspi01Gene68244.t1	ATHB3, HB-3,...	regulatory protein *(LMI1) of floral meristem identity...	0.01	OrthoFinder output from all 47 species
Aspi01Gene72348.t1	ATHB3, HB-3,...	regulatory protein *(LMI1) of floral meristem identity...	0.02	OrthoFinder output from all 47 species
Azfi_s0188.g056822	ATHB3, HB-3, ATHB-3, HAT7	HD-ZIP I/II-type transcription factor & original...	0.05	OrthoFinder output from all 47 species
Azfi_s0262.g060790	ATHB13	HD-ZIP I/II-type transcription factor & original...	0.04	OrthoFinder output from all 47 species
Azfi_s3184.g114979	No alias	not classified & original description: CDS=620-892	0.01	OrthoFinder output from all 47 species
Cba_g03981	ATHB40, HB40, HB-5	HD-ZIP I/II-type transcription factor & original...	0.01	OrthoFinder output from all 47 species
Dac_g34453	No alias	not classified & original description: none	0.07	OrthoFinder output from all 47 species
Ehy_g02341	ATHB1, ATHB-1,...	regulatory protein *(LMI1) of floral meristem identity...	0.02	OrthoFinder output from all 47 species
Ehy_g09808	ATHB1, ATHB-1,...	regulatory protein *(LMI1) of floral meristem identity...	0.01	OrthoFinder output from all 47 species
Ehy_g10606	ATHB5, ATHB-5, HB5	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Ehy_g23915	ATHB5, ATHB-5, HB5	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
GSVIVT01038619001	HB-12, ATHB-12, ATHB12	RNA biosynthesis.transcriptional activation.HB...	0.08	OrthoFinder output from all 47 species
Gb_35959	ATHB40, HB40, HB-5	transcription factor (HD-ZIP I/II)	0.03	OrthoFinder output from all 47 species
LOC_Os03g08960.1	ATHB5, ATHB-5,...	transcription factor (HD-ZIP I/II)	0.01	OrthoFinder output from all 47 species
Len_g10023	ATHB13	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Len_g45930	ATHB40, HB40, HB-5	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Lfl_g11524	ATHB1, ATHB-1,...	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
MA_10428916g0010	ATHB1, ATHB-1,...	transcription factor (HD-ZIP I/II)	0.01	OrthoFinder output from all 47 species
MA_130615g0020	HB6, ATHB6	transcription factor (HD-ZIP I/II)	0.04	OrthoFinder output from all 47 species
MA_3951g0010	ATHB13	transcription factor (HD-ZIP I/II)	0.12	OrthoFinder output from all 47 species
MA_60543g0010	ATHB3, HB-3, ATHB-3, HAT7	transcription factor (HD-ZIP I/II)	0.06	OrthoFinder output from all 47 species
MA_9241385g0010	ATHB13	transcription factor (HD-ZIP I/II)	0.02	OrthoFinder output from all 47 species
Mp3g02320.1	ATHB1, ATHB-1,...	transcription factor (HD-ZIP I/II)	0.02	OrthoFinder output from all 47 species
Nbi_g07247	ATHB21, HB21, HB-2	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Ore_g16236	ATHB1, ATHB-1,...	regulatory protein *(LMI1) of floral meristem identity...	0.01	OrthoFinder output from all 47 species
Ore_g17073	ATHB1, ATHB-1,...	regulatory protein *(LMI1) of floral meristem identity...	0.01	OrthoFinder output from all 47 species
Ore_g17855	ATHB3, HB-3, ATHB-3, HAT7	regulatory protein *(LMI1) of floral meristem identity...	0.03	OrthoFinder output from all 47 species
Ore_g29472	ATHB1, ATHB-1,...	regulatory protein *(LMI1) of floral meristem identity...	0.02	OrthoFinder output from all 47 species
Pir_g29089	ATHB1, ATHB-1,...	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Pnu_g02749	ATHB13	regulatory protein *(LMI1) of floral meristem identity...	0.03	OrthoFinder output from all 47 species
Pnu_g02929	ATHB3, HB-3, ATHB-3, HAT7	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Pnu_g32938	HB51, ATHB51, LMI1	HD-ZIP I/II-type transcription factor & original...	0.01	OrthoFinder output from all 47 species
Ppi_g63283	No alias	HD-ZIP I/II-type transcription factor & original...	0.08	OrthoFinder output from all 47 species
Sam_g35778	No alias	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Smo19476	ATHB3, HB-3, ATHB-3, HAT7	RNA biosynthesis.transcriptional activation.HB...	0.07	OrthoFinder output from all 47 species
Spa_g16234	ATHB1, ATHB-1,...	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Spa_g18476	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e004226_P001	ATHB1, ATHB-1,...	transcription factor (HD-ZIP I/II)	0.04	OrthoFinder output from all 47 species
Zm00001e015717_P003	ATHB1, ATHB-1,...	transcription factor (HD-ZIP I/II)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001356	Homeobox_dom	55	110

External Links

No external refs found!

Solyc03g034120.3.1 (ATHB40, HB40, HB-5,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation