Solyc03g033940.1.1 (AGL57, Solyc03g033940)

Aliases : AGL57, Solyc03g033940

Description : transcription factor (MADS/AGL)

Gene families : OG0011442 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0011442_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc03g033940.1.1
Cluster	HCCA: Cluster_179

Target	Alias	Description	ECC score	Gene Family Method
Solyc03g033900.1.1	AGL57, Solyc03g033900	transcription factor (MADS/AGL)	0.2	OrthoFinder output from all 47 species
Solyc04g025970.1.1	AGL91, Solyc04g025970	transcription factor (MADS/AGL)	0.01	OrthoFinder output from all 47 species
Solyc10g018080.1.1	AGL29, Solyc10g018080	transcription factor (MADS/AGL)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
MF	GO:0046983	protein dimerization activity	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002100	TF_MADSbox	18	63

External Links

No external refs found!