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Aliases : Solyc03g033600
Description : component Sm-D3 of U1/U2/U4/U5-associated Sm accessory ribonucleoprotein complex
Gene families : OG0003441 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003441_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00001p00047670 | evm_27.TU.AmTr_v1... | RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g022523 | No alias | component *(Sm-D3) of U1/U2/U4/U5-associated Sm... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g02312 | No alias | component *(Sm-D3) of U1/U2/U4/U5-associated Sm... | 0.02 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00020912.17 | No alias | RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm... | 0.01 | OrthoFinder output from all 47 species | |
| Cre10.g455300 | No alias | RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm... | 0.01 | OrthoFinder output from all 47 species | |
| Len_g00837 | No alias | component *(Sm-D3) of U1/U2/U4/U5-associated Sm... | 0.03 | OrthoFinder output from all 47 species | |
| Mp1g11210.1 | No alias | component Sm-D3 of U1/U2/U4/U5-associated Sm accessory... | 0.11 | OrthoFinder output from all 47 species | |
| Nbi_g20365 | No alias | component *(Sm-D3) of U1/U2/U4/U5-associated Sm... | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g19523 | No alias | component *(Sm-D3) of U1/U2/U4/U5-associated Sm... | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c10_12880V3.1 | Pp3c10_12880 | Small nuclear ribonucleoprotein family protein | 0.01 | OrthoFinder output from all 47 species | |
| Zm00001e001000_P001 | Zm00001e001000 | component Sm-D3 of U1/U2/U4/U5-associated Sm accessory... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e038613_P001 | Zm00001e038613 | component Sm-D3 of U1/U2/U4/U5-associated Sm accessory... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0016462 | pyrophosphatase activity | IEP | HCCA |
| MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | HCCA |
| MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | HCCA |
| MF | GO:0047429 | nucleoside triphosphate diphosphatase activity | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001163 | LSM_dom_euk/arc | 11 | 74 |
| No external refs found! |