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  5. LOC_Os10g38000

LOC_Os10g38000 (Os10g0523900)


Aliases : Os10g0523900

Description : No description available


Gene families : OG_01_0000000 (Gene family) Phylogenetic Tree(s): OG0000000_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os10g38000
Cluster HCCA cluster: Cluster_316

Target Alias Description ECC score Gene Family Method Actions
AT1G22190 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT1G22810 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT1G33760 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT1G64380 No alias Integrase-type DNA-binding superfamily protein 0.04 Gene family
AT1G77640 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT1G78080 RAP2.4 related to AP2 4 0.06 Gene family
AT2G44840 ATERF13, ERF13, EREBP ethylene-responsive element binding factor 13 0.04 Gene family
AT3G11020 DREB2B, DREB2 DRE/CRT-binding protein 2B 0.03 Gene family
AT3G23220 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT3G23240 ERF1, ATERF1 ethylene response factor 1 0.03 Gene family
AT3G57600 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT4G17490 ERF-6-6, ERF6, ATERF6 ethylene responsive element binding factor 6 0.05 Gene family
AT4G28140 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT4G39780 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT5G07310 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT5G21960 No alias Integrase-type DNA-binding superfamily protein 0.05 Gene family
AT5G50080 ERF110 ethylene response factor 110 0.03 Gene family
AT5G51190 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT5G61600 ERF104 ethylene response factor 104 0.03 Gene family
AT5G61890 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT5G65130 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
Cre08.g364400 No alias No description available 0.03 Gene family
Cre14.g620500 No alias No description available 0.01 Gene family
GSVIVT01001089001 No alias No description available 0.02 Gene family
GSVIVT01008649001 No alias No description available 0.03 Gene family
GSVIVT01013903001 No alias No description available 0.03 Gene family
GSVIVT01028050001 No alias No description available 0.02 Gene family
GSVIVT01035098001 No alias No description available 0.03 Gene family
LOC_Os02g32140 Os02g0521100 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os04g46220 Os04g0546800 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
LOC_Os04g56150 Os04g0655700 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
LOC_Os06g10780 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os06g40150 Os06g0604000 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
LOC_Os07g42510 Os07g0617000 No description available 0.03 Gene family
LOC_Os08g36920 Os08g0474000 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
LOC_Os08g41030 Os08g0521600 No description available 0.02 Gene family
LOC_Os09g28440 Os09g0457900 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
MA_10031781g0010 No alias No description available 0.03 Gene family
MA_10274g0010 No alias No description available 0.02 Gene family
MA_116185g0010 No alias No description available 0.03 Gene family
MA_162045g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_4032g0010 No alias No description available 0.03 Gene family
MA_426919g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_53147g0010 No alias No description available 0.02 Gene family
MA_54341g0010 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
MA_77420g0010 No alias No description available 0.04 Gene family
MA_81029g0010 No alias No description available 0.03 Gene family
MA_9260020g0010 No alias No description available 0.02 Gene family
Smo409196 PACid_15422590 No description available 0.02 Gene family
Solyc01g067540.1.1 Solyc01g067540.1 No description available 0.04 Gene family
Solyc02g077360.1.1 Solyc02g077360.1 No description available 0.02 Gene family
Solyc02g077840.1.1 Solyc02g077840.1 No description available 0.05 Gene family
Solyc02g090790.1.1 Solyc02g090790.1 No description available 0.02 Gene family
Solyc03g093540.1.1 Solyc03g093540.1 No description available 0.03 Gene family
Solyc03g117230.1.1 Solyc03g117230.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Solyc04g050750.1.1 Solyc04g050750.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
Solyc04g054910.3.1 Solyc04g054910.3 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Solyc05g052030.1.1 Solyc05g052030.1 No description available 0.02 Gene family
Solyc06g066540.1.1 Solyc06g066540.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.05 Gene family
Solyc09g066350.1.1 Solyc09g066350.1 No description available 0.02 Gene family
Solyc11g006050.1.1 Solyc11g006050.1 No description available 0.02 Gene family
Solyc12g013660.2.1 Solyc12g013660.2 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Solyc12g056980.1.1 Solyc12g056980.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d002744 GRMZM2G172936 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d002760 GRMZM2G475678 No description available 0.03 Gene family
Zm00001d002761 GRMZM5G805505 No description available 0.03 Gene family
Zm00001d003871 GRMZM2G079825 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d005892 GRMZM2G138396 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
Zm00001d016616 GRMZM2G016434 No description available 0.03 Gene family
Zm00001d016623 GRMZM2G047999 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.05 Gene family
Zm00001d017366 GRMZM2G139765 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.05 Gene family
Zm00001d017462 GRMZM2G466044 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
Zm00001d017478 GRMZM2G041839 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d019475 No alias No description available 0.02 Gene family
Zm00001d026271 GRMZM2G438202 No description available 0.02 Gene family
Zm00001d026563 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
Zm00001d027870 GRMZM2G419901 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d029679 GRMZM2G477287 No description available 0.05 Gene family
Zm00001d031673 GRMZM2G309731 No description available 0.02 Gene family
Zm00001d031796 GRMZM2G369472 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
Zm00001d032095 GRMZM2G050851 No description available 0.03 Gene family
Zm00001d032295 GRMZM2G061487 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.05 Gene family
Zm00001d038001 GRMZM2G093595 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d038320 GRMZM2G100727 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d038584 GRMZM2G020016 No description available 0.03 Gene family
Zm00001d039077 GRMZM5G846057 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.05 Gene family
Zm00001d043205 GRMZM2G310368 17.5.2 hormone metabolism.ethylene.signal transduction... 0.05 Gene family
Zm00001d045204 GRMZM2G301860 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d046501 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
Zm00001d048208 GRMZM2G113060 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d051239 GRMZM2G300924 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
Zm00001d051340 GRMZM2G319786 No description available 0.06 Gene family
Zm00001d052102 GRMZM2G097081 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d052167 GRMZM2G173771 No description available 0.03 Gene family
Zm00001d052229 GRMZM2G029323 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d053195 GRMZM2G076896 No description available 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 34 83
No external refs found!