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  5. Solyc03g031990.4.1

Solyc03g031990.4.1 (Solyc03g031990)


Aliases : Solyc03g031990

Description : auxin efflux transporter (PILS). auxin transporter (PILS)


Gene families : OG0000887 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000887_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g031990.4.1
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
Ala_g26995 No alias auxin transporter *(PILS) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene52944.t1 Aspi01Gene52944 auxin transporter *(PILS) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g12635 No alias auxin transporter *(PILS) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g15814 No alias auxin transporter *(PILS) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01022301001 No alias Solute transport.carrier-mediated transport.BART... 0.03 OrthoFinder output from all 47 species
GSVIVT01030905001 No alias Solute transport.carrier-mediated transport.BART... 0.03 OrthoFinder output from all 47 species
Ore_g29482 No alias auxin transporter *(PILS) & original description: none 0.03 OrthoFinder output from all 47 species
Smo230605 No alias Solute transport.carrier-mediated transport.BART... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003747 translation release factor activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0006415 translational termination IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006772 thiamine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
MF GO:0008079 translation termination factor activity IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009228 thiamine biosynthetic process IEP HCCA
BP GO:0022411 cellular component disassembly IEP HCCA
BP GO:0032984 protein-containing complex disassembly IEP HCCA
BP GO:0034308 primary alcohol metabolic process IEP HCCA
BP GO:0034309 primary alcohol biosynthetic process IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042723 thiamine-containing compound metabolic process IEP HCCA
BP GO:0042724 thiamine-containing compound biosynthetic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0046165 alcohol biosynthetic process IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0072527 pyrimidine-containing compound metabolic process IEP HCCA
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901617 organic hydroxy compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004776 Mem_trans 10 296
No external refs found!