1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc03g026230.1.1

Solyc03g026230.1.1 (Solyc03g026230)


Aliases : Solyc03g026230

Description : metabolite transporter (DTX)


Gene families : OG0000713 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000713_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g026230.1.1
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00033p00071400 ZF14,... Solute transport.carrier-mediated transport.MOP... 0.02 OrthoFinder output from all 47 species
AMTR_s00069p00129640 ZF14,... Solute transport.carrier-mediated transport.MOP... 0.03 OrthoFinder output from all 47 species
AMTR_s00077p00047440 ZF14,... Solute transport.carrier-mediated transport.MOP... 0.03 OrthoFinder output from all 47 species
AMTR_s03617p00002910 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.MOP... 0.03 OrthoFinder output from all 47 species
AT5G52050 No alias MATE efflux family protein 0.07 OrthoFinder output from all 47 species
Ala_g18449 ZF14 metabolite transporter *(DTX) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g25435 ZF14 metabolite transporter *(DTX) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g09876 ZF14 metabolite transporter *(DTX) & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0036.g025796 No alias metabolite transporter *(DTX) & original description: CDS=80-1768 0.02 OrthoFinder output from all 47 species
Ceric.15G004200.1 ZF14, Ceric.15G004200 metabolite transporter *(DTX) & original description:... 0.04 OrthoFinder output from all 47 species
Ehy_g02506 No alias metabolite transporter *(DTX) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01019858001 No alias Solute transport.carrier-mediated transport.MOP... 0.1 OrthoFinder output from all 47 species
Gb_04836 ZF14 metabolite transporter (DTX) 0.04 OrthoFinder output from all 47 species
Gb_35744 No alias metabolite transporter (DTX) 0.03 OrthoFinder output from all 47 species
Gb_41153 No alias metabolite transporter (DTX) 0.02 OrthoFinder output from all 47 species
LOC_Os03g64150.1 LOC_Os03g64150 metabolite transporter (DTX). bicarbonate signal... 0.02 OrthoFinder output from all 47 species
LOC_Os04g48290.1 LOC_Os04g48290 metabolite transporter (DTX) 0.07 OrthoFinder output from all 47 species
LOC_Os09g35600.1 LOC_Os09g35600 metabolite transporter (DTX) 0.02 OrthoFinder output from all 47 species
LOC_Os10g37920.1 LOC_Os10g37920 metabolite transporter (DTX) 0.03 OrthoFinder output from all 47 species
MA_118262g0010 No alias metabolite transporter (DTX) 0.02 OrthoFinder output from all 47 species
MA_14669g0010 ZF14 metabolite transporter (DTX) 0.04 OrthoFinder output from all 47 species
Mp3g04300.1 ZF14 metabolite transporter (DTX) 0.07 OrthoFinder output from all 47 species
Nbi_g15558 ZF14 metabolite transporter *(DTX) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g36060 ZF14 metabolite transporter *(DTX) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g17339 ZF14 metabolite transporter *(DTX) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g54682 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pnu_g21965 No alias metabolite transporter *(DTX) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0073.g017134 ZF14 metabolite transporter *(DTX) & original description: CDS=75-1706 0.03 OrthoFinder output from all 47 species
Smo115401 No alias Solute transport.carrier-mediated transport.MOP... 0.02 OrthoFinder output from all 47 species
Solyc02g090740.3.1 ZF14, Solyc02g090740 metabolite transporter (DTX) 0.05 OrthoFinder output from all 47 species
Solyc08g080310.2.1 Solyc08g080310 metabolite transporter (DTX) 0.03 OrthoFinder output from all 47 species
Spa_g39612 ZF14 metabolite transporter *(DTX) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g31838 ZF14 metabolite transporter *(DTX) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e002148_P001 Zm00001e002148 metabolite transporter (DTX) 0.03 OrthoFinder output from all 47 species
Zm00001e003751_P001 Zm00001e003751 metabolite transporter (DTX) 0.01 OrthoFinder output from all 47 species
Zm00001e007209_P001 Zm00001e007209 metabolite transporter (DTX) 0.06 OrthoFinder output from all 47 species
Zm00001e011680_P002 Zm00001e011680 metabolite transporter (DTX) 0.01 OrthoFinder output from all 47 species
Zm00001e015427_P001 Zm00001e015427 metabolite transporter (DTX) 0.03 OrthoFinder output from all 47 species
Zm00001e041426_P001 Zm00001e041426 metabolite transporter (DTX) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0015297 antiporter activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0042910 xenobiotic transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002528 MATE_fam 71 231
IPR002528 MATE_fam 292 453
No external refs found!