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  5. Solyc03g026070.4.1

Solyc03g026070.4.1 (HDG1, HD-GL2-1, Solyc03g026070)


Aliases : HDG1, HD-GL2-1, Solyc03g026070

Description : transcription factor (HD-ZIP IV)


Gene families : OG0000253 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000253_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g026070.4.1
Cluster HCCA: Cluster_313

Target Alias Description ECC score Gene Family Method Actions
AT4G04890 PDF2 protodermal factor 2 0.02 OrthoFinder output from all 47 species
AT4G21750 ATML1 Homeobox-leucine zipper family protein / lipid-binding... 0.01 OrthoFinder output from all 47 species
Ala_g23646 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05720 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g09754 ATML1 HD-ZIP IV-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0006.g009667 PDF2 HD-ZIP IV-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0038.g026173 PDF2 HD-ZIP IV-type transcription factor & original... 0.05 OrthoFinder output from all 47 species
Azfi_s0064.g035524 PDF2 HD-ZIP IV-type transcription factor & original... 0.01 OrthoFinder output from all 47 species
Azfi_s0100.g044331 PDF2 HD-ZIP IV-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0131.g049156 PDF2 HD-ZIP IV-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Cba_g70526 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.18G081200.1 ATML1, Ceric.18G081200 HD-ZIP IV-type transcription factor & original... 0.05 OrthoFinder output from all 47 species
Ceric.18G081600.1 ATML1, Ceric.18G081600 HD-ZIP IV-type transcription factor & original... 0.05 OrthoFinder output from all 47 species
Ceric.1Z008300.1 PDF2, Ceric.1Z008300 HD-ZIP IV-type transcription factor & original... 0.06 OrthoFinder output from all 47 species
Ceric.1Z119300.1 HDG2, Ceric.1Z119300 HD-ZIP IV-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Dcu_g41966 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g25466 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g39944 ATML1 HD-ZIP IV-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Gb_05082 PDF2 transcription factor (HD-ZIP IV) 0.02 OrthoFinder output from all 47 species
Msp_g21421 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0070.g016693 PDF2 HD-ZIP IV-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Solyc02g080260.4.1 PDF2, Solyc02g080260 transcription factor (HD-ZIP IV) 0.03 OrthoFinder output from all 47 species
Solyc10g005330.3.1 PDF2, Solyc10g005330 transcription factor (HD-ZIP IV) 0.03 OrthoFinder output from all 47 species
Tin_g13777 HDG2 HD-ZIP IV-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e002453_P001 HDG5, HB-7,... transcription factor (HD-ZIP IV) 0.04 OrthoFinder output from all 47 species
Zm00001e039947_P001 HDG2, Zm00001e039947 transcription factor (HD-ZIP IV) 0.04 OrthoFinder output from all 47 species
Zm00001e042218_P002 HDG2, Zm00001e042218 transcription factor (HD-ZIP IV) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0008289 lipid binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001356 Homeobox_dom 115 169
IPR002913 START_lipid-bd_dom 323 544
No external refs found!