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  5. Solyc03g025400.3.1

Solyc03g025400.3.1 (Solyc03g025400)


Aliases : Solyc03g025400

Description : component Tic32 of inner envelope TIC translocation system


Gene families : OG0000190 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000190_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g025400.3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00229030 evm_27.TU.AmTr_v1... Protein translocation.chloroplast.inner envelope TIC... 0.04 OrthoFinder output from all 47 species
Aev_g06451 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g16311 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0265.g060946 No alias not classified & original description: CDS=567-1532 0.04 OrthoFinder output from all 47 species
Cba_g11101 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g57562 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g10667 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g58753 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0016.g006778 No alias not classified & original description: CDS=138-1193 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0059.g015042 No alias not classified & original description: CDS=873-1517 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0051011 microtubule minus-end binding IEP HCCA
InterPro domains Description Start Stop
IPR002347 SDR_fam 32 173
No external refs found!