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  5. Solyc03g006490.3.1

Solyc03g006490.3.1 (Solyc03g006490)


Aliases : Solyc03g006490

Description : Stem-specific protein TSJT1 OS=Nicotiana tabacum (sp|p24805|tsjt1_tobac : 121.0)


Gene families : OG0000573 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000573_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g006490.3.1

Target Alias Description ECC score Gene Family Method Actions
AT3G15450 No alias Aluminium induced protein with YGL and LRDR motifs 0.04 OrthoFinder output from all 47 species
Aop_g01042 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01002031001 No alias Stem-specific protein TSJT1 OS=Nicotiana tabacum 0.03 OrthoFinder output from all 47 species
GSVIVT01007435001 No alias Stem-specific protein TSJT1 OS=Nicotiana tabacum 0.05 OrthoFinder output from all 47 species
MA_10434639g0010 No alias Stem-specific protein TSJT1 OS=Nicotiana tabacum... 0.03 OrthoFinder output from all 47 species
MA_209710g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g12354 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc01g079880.3.1 ATAILP1, AILP1,... Stem-specific protein TSJT1 OS=Nicotiana tabacum... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
BP GO:0006835 dicarboxylic acid transport IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015035 protein-disulfide reductase activity IEP HCCA
MF GO:0015036 disulfide oxidoreductase activity IEP HCCA
BP GO:0015711 organic anion transport IEP HCCA
BP GO:0015740 C4-dicarboxylate transport IEP HCCA
BP GO:0015743 malate transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
BP GO:0046942 carboxylic acid transport IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
InterPro domains Description Start Stop
IPR024286 DUF3700 2 230
No external refs found!