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  5. LOC_Os03g25380.1

LOC_Os03g25380.1


Description : Pentatricopeptide repeat-containing protein At1g28690, mitochondrial OS=Arabidopsis thaliana (sp|q1pfq9|ppr62_arath : 452.0)


Gene families : OG_01_0012983 (Archaeplastida) Phylogenetic Tree(s): OG_01_0012983_tree ,
OG_02_0012948 (LandPlants) Phylogenetic Tree(s): OG_02_0012948_tree ,
OG_03_0013004 (SeedPlants) Phylogenetic Tree(s): OG_03_0013004_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g25380.1
Cluster HCCA: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
Solyc11g010260.3.1 No alias Pentatricopeptide repeat-containing protein At1g28690,... 0.09 Archaeplastida
Zm00001e024014_P001 No alias no hits & (original description: none) 0.12 Archaeplastida
Solyc11g010260.3.1 No alias Pentatricopeptide repeat-containing protein At1g28690,... 0.08 LandPlants
Solyc11g010260.3.1 No alias Pentatricopeptide repeat-containing protein At1g28690,... 0.1 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 96 118
IPR002885 Pentatricopeptide_repeat 222 270
IPR002885 Pentatricopeptide_repeat 325 376
No external refs found!