Aliases : AtRABA1f, RABA1f, Solyc03g006270
Description : A-class RAB GTPase
Gene families : OG0000247 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000247_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Solyc03g006270.3.1 | |
Cluster | HCCA: Cluster_94 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00108p00135260 | AtRABA1f,... | Vesicle trafficking.regulation of membrane tethering and... | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00148p00100780 | AtRABA5a,... | Ras-related protein RABA5a OS=Arabidopsis thaliana | 0.06 | OrthoFinder output from all 47 species | |
AT1G05810 | ARA-1, ATRABA5E,... | RAB GTPase homolog A5E | 0.04 | OrthoFinder output from all 47 species | |
AT1G07410 | RABA2b,... | RAB GTPase homolog A2B | 0.03 | OrthoFinder output from all 47 species | |
AT1G28550 | RABA1i, AtRABA1i | RAB GTPase homolog A1I | 0.03 | OrthoFinder output from all 47 species | |
AT1G73640 | RABA6a, AtRABA6a | RAB GTPase homolog A6A | 0.03 | OrthoFinder output from all 47 species | |
AT2G33870 | ArRABA1h | RAB GTPase homolog A1H | 0.03 | OrthoFinder output from all 47 species | |
Aob_g27252 | AtRABA5d, RABA5d | A-class RAB GTPase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aop_g01569 | AtRABA5a, RABA5a | A-class RAB GTPase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aop_g01612 | RABA2b,... | A-class RAB GTPase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aop_g22467 | ATRABA5C, ARA4,... | A-class RAB GTPase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Azfi_s0056.g034200 | AtRABA1f, RABA1f | A-class RAB GTPase & original description: CDS=99-740 | 0.03 | OrthoFinder output from all 47 species | |
Ceric.16G022800.1 | AtRABA1f,... | A-class RAB GTPase & original description:... | 0.03 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00020961.97 | AtRABA1e, RABA1e | Vesicle trafficking.regulation of membrane tethering and... | 0.01 | OrthoFinder output from all 47 species | |
Cre03.g189250 | ATRABA2A,... | Vesicle trafficking.regulation of membrane tethering and... | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g02057 | AtRABA1f, RABA1f | A-class RAB GTPase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g05302 | AtRABA1f, RABA1f | A-class RAB GTPase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os01g47730.1 | AtRABA1f,... | A-class RAB GTPase | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os07g44040.1 | AtRABA5a,... | A-class RAB GTPase | 0.04 | OrthoFinder output from all 47 species | |
Len_g16053 | ATRABA5C, ARA4,... | A-class RAB GTPase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
MA_18685g0010 | AtRABA5d, RABA5d | A-class RAB GTPase | 0.03 | OrthoFinder output from all 47 species | |
Ore_g15033 | AtRABA1f, RABA1f | A-class RAB GTPase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pnu_g10780 | AtRABA5a, RABA5a | A-class RAB GTPase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g61287 | ARA-1, ATRABA5E,... | A-class RAB GTPase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Smo146310 | AtRABA1f, RABA1f | Vesicle trafficking.regulation of membrane tethering and... | 0.03 | OrthoFinder output from all 47 species | |
Spa_g12437 | AtRABA5a, RABA5a | A-class RAB GTPase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Tin_g05879 | AtRABA1f, RABA1f | A-class RAB GTPase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e030680_P001 | ATHSGBP, RABA1d,... | A-class RAB GTPase | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003924 | GTPase activity | IEA | Interproscan |
MF | GO:0005525 | GTP binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004497 | monooxygenase activity | IEP | HCCA |
MF | GO:0005215 | transporter activity | IEP | HCCA |
CC | GO:0005737 | cytoplasm | IEP | HCCA |
BP | GO:0006020 | inositol metabolic process | IEP | HCCA |
BP | GO:0006066 | alcohol metabolic process | IEP | HCCA |
BP | GO:0006810 | transport | IEP | HCCA |
BP | GO:0006813 | potassium ion transport | IEP | HCCA |
BP | GO:0008272 | sulfate transport | IEP | HCCA |
MF | GO:0015079 | potassium ion transmembrane transporter activity | IEP | HCCA |
MF | GO:0015103 | inorganic anion transmembrane transporter activity | IEP | HCCA |
MF | GO:0015116 | sulfate transmembrane transporter activity | IEP | HCCA |
MF | GO:0015318 | inorganic molecular entity transmembrane transporter activity | IEP | HCCA |
BP | GO:0015698 | inorganic anion transport | IEP | HCCA |
BP | GO:0016052 | carbohydrate catabolic process | IEP | HCCA |
MF | GO:0016701 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen | IEP | HCCA |
BP | GO:0019310 | inositol catabolic process | IEP | HCCA |
BP | GO:0019751 | polyol metabolic process | IEP | HCCA |
MF | GO:0022857 | transmembrane transporter activity | IEP | HCCA |
MF | GO:0030599 | pectinesterase activity | IEP | HCCA |
BP | GO:0034220 | monoatomic ion transmembrane transport | IEP | HCCA |
BP | GO:0042545 | cell wall modification | IEP | HCCA |
BP | GO:0044275 | cellular carbohydrate catabolic process | IEP | HCCA |
BP | GO:0044282 | small molecule catabolic process | IEP | HCCA |
BP | GO:0045229 | external encapsulating structure organization | IEP | HCCA |
BP | GO:0046164 | alcohol catabolic process | IEP | HCCA |
BP | GO:0046174 | polyol catabolic process | IEP | HCCA |
MF | GO:0046873 | metal ion transmembrane transporter activity | IEP | HCCA |
MF | GO:0050113 | inositol oxygenase activity | IEP | HCCA |
BP | GO:0050896 | response to stimulus | IEP | HCCA |
BP | GO:0051179 | localization | IEP | HCCA |
BP | GO:0051234 | establishment of localization | IEP | HCCA |
MF | GO:0052689 | carboxylic ester hydrolase activity | IEP | HCCA |
BP | GO:0071554 | cell wall organization or biogenesis | IEP | HCCA |
BP | GO:0071555 | cell wall organization | IEP | HCCA |
BP | GO:0071805 | potassium ion transmembrane transport | IEP | HCCA |
BP | GO:0072348 | sulfur compound transport | IEP | HCCA |
BP | GO:0098655 | monoatomic cation transmembrane transport | IEP | HCCA |
BP | GO:0098662 | inorganic cation transmembrane transport | IEP | HCCA |
BP | GO:1901615 | organic hydroxy compound metabolic process | IEP | HCCA |
BP | GO:1901616 | organic hydroxy compound catabolic process | IEP | HCCA |
MF | GO:1901682 | sulfur compound transmembrane transporter activity | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001806 | Small_GTPase | 15 | 175 |
No external refs found! |