Solyc03g005820.3.1 (Solyc03g005820)


Aliases : Solyc03g005820

Description : organic cation transporter (PUP)


Gene families : OG0000721 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000721_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g005820.3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00068p00197770 PUP4, ATPUP4,... Solute transport.carrier-mediated transport.DMT... 0.03 OrthoFinder output from all 47 species
AMTR_s00135p00097090 PUP1, ATPUP1,... Solute transport.carrier-mediated transport.DMT... 0.03 OrthoFinder output from all 47 species
AMTR_s00135p00099660 PUP1, ATPUP1,... Solute transport.carrier-mediated transport.DMT... 0.05 OrthoFinder output from all 47 species
AT2G33750 ATPUP2, PUP2 purine permease 2 0.04 OrthoFinder output from all 47 species
AT4G18205 No alias Nucleotide-sugar transporter family protein 0.03 OrthoFinder output from all 47 species
AT4G18210 ATPUP10, PUP10 purine permease 10 0.04 OrthoFinder output from all 47 species
Adi_g001169 ATPUP3, PUP3 organic cation transporter *(PUP) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g105179 ATPUP3, PUP3 organic cation transporter *(PUP) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30858 ATPUP3, PUP3 organic cation transporter *(PUP) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g33273 PUP1, ATPUP1 organic cation transporter *(PUP) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g15848 ATPUP3, PUP3 organic cation transporter *(PUP) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene39612.t1 ATPUP3, PUP3,... organic cation transporter *(PUP) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene60644.t1 ATPUP3, PUP3,... organic cation transporter *(PUP) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0057.g034276 PUP1, ATPUP1 organic cation transporter *(PUP) & original... 0.04 OrthoFinder output from all 47 species
Cba_g18304 ATPUP3, PUP3 organic cation transporter *(PUP) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g75386 ATPUP3, PUP3 organic cation transporter *(PUP) & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.01G095800.1 PUP1, ATPUP1,... organic cation transporter *(PUP) & original... 0.04 OrthoFinder output from all 47 species
Ceric.04G055300.1 PUP1, ATPUP1,... organic cation transporter *(PUP) & original... 0.05 OrthoFinder output from all 47 species
Dac_g01642 No alias organic cation transporter *(PUP) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g16593 ATPUP3, PUP3 organic cation transporter *(PUP) & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g22363 ATPUP3, PUP3 organic cation transporter *(PUP) & original description: none 0.03 OrthoFinder output from all 47 species
Gb_02956 PUP1, ATPUP1 organic cation transporter (PUP) 0.03 OrthoFinder output from all 47 species
Gb_32685 ATPUP3, PUP3 organic cation transporter (PUP) 0.04 OrthoFinder output from all 47 species
LOC_Os02g46380.1 ATPUP11, PUP11,... organic cation transporter (PUP) 0.03 OrthoFinder output from all 47 species
LOC_Os04g49748.1 ATPUP11, PUP11,... organic cation transporter (PUP) 0.03 OrthoFinder output from all 47 species
LOC_Os09g29239.1 ATPUP3, PUP3,... organic cation transporter (PUP) 0.03 OrthoFinder output from all 47 species
MA_580238g0010 ATPUP11, PUP11 organic cation transporter (PUP) 0.04 OrthoFinder output from all 47 species
Msp_g25477 ATPUP3, PUP3 organic cation transporter *(PUP) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g09776 ATPUP11, PUP11 organic cation transporter *(PUP) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g30461 ATPUP3, PUP3 organic cation transporter *(PUP) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g31642 ATPUP3, PUP3 organic cation transporter *(PUP) & original description: none 0.05 OrthoFinder output from all 47 species
Smo236291 ATPUP5, PUP5 Solute transport.carrier-mediated transport.DMT... 0.04 OrthoFinder output from all 47 species
Smo417455 ATPUP5, PUP5 Solute transport.carrier-mediated transport.DMT... 0.05 OrthoFinder output from all 47 species
Solyc12g087870.2.1 PUP1, ATPUP1,... organic cation transporter (PUP) 0.03 OrthoFinder output from all 47 species
Spa_g22681 ATPUP3, PUP3 organic cation transporter *(PUP) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g41091 ATPUP3, PUP3 organic cation transporter *(PUP) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g20525 PUP1, ATPUP1 organic cation transporter *(PUP) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e034411_P001 ATPUP3, PUP3,... organic cation transporter (PUP) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!