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  5. Solyc03g005420.2.1

Solyc03g005420.2.1 (Solyc03g005420)


Aliases : Solyc03g005420

Description : Flotillin-class protein


Gene families : OG0002629 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002629_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g005420.2.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00187530 evm_27.TU.AmTr_v1... Vesicle trafficking.clathrin-independent... 0.03 OrthoFinder output from all 47 species
Als_g13286 No alias adapter protein *(FLOT) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g23232 No alias adapter protein *(FLOT) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01017520001 No alias Vesicle trafficking.clathrin-independent... 0.02 OrthoFinder output from all 47 species
Zm00001e012661_P001 Zm00001e012661 Flotillin-class protein 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001107 Band_7 6 185
No external refs found!