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  5. Solyc02g094400.4.1

Solyc02g094400.4.1 (SRG3, Solyc02g094400)


Aliases : SRG3, Solyc02g094400

Description : Glycerophosphodiester phosphodiesterase GDPD1, chloroplastic OS=Arabidopsis thaliana (sp|q9sga2|gdpd1_arath : 483.0)


Gene families : OG0002257 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002257_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g094400.4.1
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
AT3G02040 SRG3 senescence-related gene 3 0.1 OrthoFinder output from all 47 species
Adi_g046392 SRG3 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g26572 SRG3 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ceric.18G077700.1 SRG3, Ceric.18G077700 not classified & original description: pacid=50621128... 0.05 OrthoFinder output from all 47 species
Dac_g13367 SRG3 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g15032 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g36540 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g07362 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_23497 SRG3 Glycerophosphodiester phosphodiesterase GDPD1,... 0.09 OrthoFinder output from all 47 species
Len_g03736 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g11904 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_27441g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Msp_g05939 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g05694 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g35470 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g04518 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Tin_g07714 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEA Interproscan
MF GO:0008081 phosphoric diester hydrolase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016791 phosphatase activity IEP HCCA
InterPro domains Description Start Stop
IPR030395 GP_PDE_dom 45 323
No external refs found!