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  5. Solyc02g094350.3.1

Solyc02g094350.3.1 (MUB4, Solyc02g094350)


Aliases : MUB4, Solyc02g094350

Description : ubiquitin-fold protein (MUB)


Gene families : OG0001418 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001418_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g094350.3.1
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
Adi_g022557 MUB6 MUB ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g051742 MUB6 MUB ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.1Z001800.1 MUB6, Ceric.1Z001800 MUB ubiquitin-fold protein & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.22G035600.1 MUB2, Ceric.22G035600 MUB ubiquitin-fold protein & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g32552 MUB6 MUB ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g11611 MUB6 MUB ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01011498001 MUB1 Protein degradation.peptide... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000045 autophagosome assembly IEP HCCA
MF GO:0000976 transcription cis-regulatory region binding IEP HCCA
MF GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding IEP HCCA
MF GO:0001067 transcription regulatory region nucleic acid binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007033 vacuole organization IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0032422 purine-rich negative regulatory element binding IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
BP GO:0070925 organelle assembly IEP HCCA
BP GO:1905037 autophagosome organization IEP HCCA
MF GO:1990837 sequence-specific double-stranded DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR039540 UBL3-like_ubiquitin_dom 5 116
No external refs found!