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  5. Solyc02g094200.3.1

Solyc02g094200.3.1 (NTF2B, Solyc02g094200)


Aliases : NTF2B, Solyc02g094200

Description : Nuclear transport factor 2B OS=Arabidopsis thaliana (sp|q9c7f5|ntf2b_arath : 218.0)


Gene families : OG0001799 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001799_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g094200.3.1

Target Alias Description ECC score Gene Family Method Actions
AT1G27310 NTF2A nuclear transport factor 2A 0.05 OrthoFinder output from all 47 species
Adi_g087970 NTF2B RanGDP-specific nuclear import factor *(NTF2) & original... 0.03 OrthoFinder output from all 47 species
Aob_g00910 NTF2A RanGDP-specific nuclear import factor *(NTF2) & original... 0.04 OrthoFinder output from all 47 species
Cba_g24036 NTF2A RanGDP-specific nuclear import factor *(NTF2) & original... 0.03 OrthoFinder output from all 47 species
Ceric.05G064200.1 NTF2A, Ceric.05G064200 RanGDP-specific nuclear import factor *(NTF2) & original... 0.05 OrthoFinder output from all 47 species
Gb_33382 NTF2B Nuclear transport factor 2B OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_35964 NTF2A Nuclear transport factor 2A OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Mp6g01400.1 NTF2B Nuclear transport factor 2B OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Msp_g33127 NTF2A RanGDP-specific nuclear import factor *(NTF2) & original... 0.04 OrthoFinder output from all 47 species
Nbi_g40953 NTF2A RanGDP-specific nuclear import factor *(NTF2) & original... 0.04 OrthoFinder output from all 47 species
Smo230884 NTF2A Nuclear transport factor 2B OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc05g015630.3.1 NTF2A, Solyc05g015630 Nuclear transport factor 2B OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g56044 NTF2A RanGDP-specific nuclear import factor *(NTF2) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003779 actin binding IEP HCCA
CC GO:0005750 mitochondrial respiratory chain complex III IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006897 endocytosis IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009060 aerobic respiration IEP HCCA
BP GO:0015980 energy derivation by oxidation of organic compounds IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0019646 aerobic electron transport chain IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
BP GO:0022904 respiratory electron transport chain IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
CC GO:0045275 respiratory chain complex III IEP HCCA
BP GO:0045333 cellular respiration IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
CC GO:0070069 cytochrome complex IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
CC GO:0098803 respiratory chain complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1902495 transmembrane transporter complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
CC GO:1990351 transporter complex IEP HCCA
InterPro domains Description Start Stop
IPR002075 NTF2_dom 6 120
No external refs found!