1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc02g092470.3.1

Solyc02g092470.3.1 (FH6, ATFH6, Solyc02g092470)


Aliases : FH6, ATFH6, Solyc02g092470

Description : group-I formin actin filament elongation factor


Gene families : OG0001137 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001137_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g092470.3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00097480 evm_27.TU.AmTr_v1... Cytoskeleton.microfilament network.actin... 0.04 OrthoFinder output from all 47 species
AMTR_s00164p00033930 FH6, ATFH6,... Cytoskeleton.microfilament network.actin... 0.03 OrthoFinder output from all 47 species
AT2G43800 No alias Actin-binding FH2 (formin homology 2) family protein 0.02 OrthoFinder output from all 47 species
AT3G07540 No alias Actin-binding FH2 (formin homology 2) family protein 0.03 OrthoFinder output from all 47 species
AT3G25500 AHF1, FH1, AFH1, ATFH1 formin homology 1 0.07 OrthoFinder output from all 47 species
GSVIVT01038194001 No alias Cytoskeleton.microfilament network.actin... 0.06 OrthoFinder output from all 47 species
LOC_Os04g01070.1 ATFH5, Fh5,... group-I formin actin filament elongation factor 0.02 OrthoFinder output from all 47 species
LOC_Os04g38810.1 LOC_Os04g38810 group-I formin actin filament elongation factor 0.05 OrthoFinder output from all 47 species
Ppi_g56831 AHF1, FH1, AFH1, ATFH1 group-I formin actin filament elongation factor &... 0.05 OrthoFinder output from all 47 species
Sam_g03974 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g12660 No alias group-I formin actin filament elongation factor &... 0.03 OrthoFinder output from all 47 species
Zm00001e018960_P001 AHF1, FH1, AFH1,... group-I formin actin filament elongation factor 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR015425 FH2_Formin 444 838
No external refs found!