Solyc02g092330.3.1 (ARLA1C, ATARLA1C,...)

Aliases : ARLA1C, ATARLA1C, Solyc02g092330

Description : small GTPase (ARL8)

Gene families : OG0002135 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002135_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc02g092330.3.1
Cluster	HCCA: Cluster_308

Target	Alias	Description	ECC score	Gene Family Method
AT3G49870	ARLA1C, ATARLA1C	ADP-ribosylation factor-like A1C	0.02	OrthoFinder output from all 47 species
Aop_g17859	ARLA1C, ATARLA1C	small GTPase *(ARL8) & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.29G007600.1	ARLA1A,...	small GTPase *(ARL8) & original description:...	0.04	OrthoFinder output from all 47 species
Ore_g04694	ARLA1C, ATARLA1C	small GTPase *(ARL8) & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0020.g008146	ARLA1D, ATARLA1D	small GTPase *(ARL8) & original description: CDS=196-753	0.01	OrthoFinder output from all 47 species
Spa_g05829	ARLA1C, ATARLA1C	small GTPase *(ARL8) & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e015736_P001	ARLA1A,...	small GTPase (ARL8)	0.08	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004435	phosphatidylinositol phospholipase C activity	IEP	HCCA
MF	GO:0004620	phospholipase activity	IEP	HCCA
MF	GO:0004629	phospholipase C activity	IEP	HCCA
BP	GO:0006629	lipid metabolic process	IEP	HCCA
BP	GO:0007165	signal transduction	IEP	HCCA
MF	GO:0008081	phosphoric diester hydrolase activity	IEP	HCCA
MF	GO:0016298	lipase activity	IEP	HCCA
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	HCCA
BP	GO:0035556	intracellular signal transduction	IEP	HCCA
MF	GO:0042578	phosphoric ester hydrolase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006689	Small_GTPase_ARF/SAR	9	178

External Links

No external refs found!