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  5. Solyc02g091810.2.1

Solyc02g091810.2.1 (Solyc02g091810)


Aliases : Solyc02g091810

Description : transcription factor (bHLH). bHLH-IVa-class iron homeostasis regulator


Gene families : OG0001148 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001148_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g091810.2.1

Target Alias Description ECC score Gene Family Method Actions
AT2G22760 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G22770 NAI1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.09 OrthoFinder output from all 47 species
AT4G37850 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 OrthoFinder output from all 47 species
Aev_g03958 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g04929 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene66514.t1 Aspi01Gene66514 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01002833001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
GSVIVT01003697001 NAI1 RNA biosynthesis.transcriptional activation.bHLH... 0.06 OrthoFinder output from all 47 species
GSVIVT01003701001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.06 OrthoFinder output from all 47 species
GSVIVT01004409001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.05 OrthoFinder output from all 47 species
GSVIVT01006588001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.06 OrthoFinder output from all 47 species
GSVIVT01036959001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.06 OrthoFinder output from all 47 species
Gb_13728 No alias transcription factor (bHLH). bHLH-IVa-class iron... 0.03 OrthoFinder output from all 47 species
LOC_Os03g12760.1 LOC_Os03g12760 transcription factor (bHLH). bHLH-IVa-class iron... 0.05 OrthoFinder output from all 47 species
LOC_Os03g46860.1 LOC_Os03g46860 transcription factor (bHLH). bHLH-IVa-class iron... 0.06 OrthoFinder output from all 47 species
LOC_Os03g51580.1 LOC_Os03g51580 transcription factor (bHLH). bHLH-IVa-class iron... 0.03 OrthoFinder output from all 47 species
LOC_Os12g43620.1 LOC_Os12g43620 transcription factor (bHLH). bHLH-IVa-class iron... 0.07 OrthoFinder output from all 47 species
Lfl_g20093 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g30933 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_142125g0020 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_149167g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_50811g0010 NAI1 transcription factor (bHLH). bHLH-IVa-class iron... 0.03 OrthoFinder output from all 47 species
Msp_g48784 NAI1 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g37020 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g35905 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc05g009640.4.1 Solyc05g009640 transcription factor (bHLH) 0.07 OrthoFinder output from all 47 species
Tin_g00716 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e002570_P001 Zm00001e002570 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Zm00001e003314_P001 Zm00001e003314 transcription factor (bHLH). bHLH-IVa-class iron... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006952 defense response IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 130 176
No external refs found!