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  5. Solyc02g091710.3.1

Solyc02g091710.3.1 (Solyc02g091710)


Aliases : Solyc02g091710

Description : ubiquitin protein ligase (WAV3)


Gene families : OG0000599 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000599_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Solyc02g091710.3.1
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AT1G08050 No alias Zinc finger (C3HC4-type RING finger) family protein 0.04 OrthoFinder output from all 47 species
AT5G49665 No alias Zinc finger (C3HC4-type RING finger) family protein 0.03 OrthoFinder output from all 47 species
Aspi01Gene22775.t1 Aspi01Gene22775 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.24G014600.1 Ceric.24G014600 not classified & original description: pacid=50629291... 0.05 OrthoFinder output from all 47 species
GSVIVT01009240001 No alias E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
LOC_Os03g04890.1 LOC_Os03g04890 E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os04g42980.1 LOC_Os04g42980 E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os10g32740.1 LOC_Os10g32740 E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Msp_g15586 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g24649 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g20735 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007353 No alias not classified & original description: CDS=1-2007 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0137.g022462 No alias not classified & original description: CDS=13-2373 0.02 OrthoFinder output from all 47 species
Sam_g52375 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc04g076860.3.1 Solyc04g076860 ubiquitin protein ligase (WAV3) 0.03 OrthoFinder output from all 47 species
Spa_g14647 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e000344_P001 Zm00001e000344 E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e010994_P001 Zm00001e010994 E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
InterPro domains Description Start Stop
IPR002035 VWF_A 319 472
IPR001841 Znf_RING 120 149
No external refs found!