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  5. Solyc02g091500.1.1

Solyc02g091500.1.1 (Solyc02g091500)


Aliases : Solyc02g091500

Description : Calcium-binding protein CML24 OS=Arabidopsis thaliana (sp|p25070|cml24_arath : 151.0)


Gene families : OG0000383 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000383_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g091500.1.1
Cluster HCCA: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00172050 CML39, CML37,... Probable calcium-binding protein CML10 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
AT1G18210 No alias Calcium-binding EF-hand family protein 0.05 OrthoFinder output from all 47 species
AT1G66400 CML23 calmodulin like 23 0.03 OrthoFinder output from all 47 species
AT5G37770 TCH2, CML24 EF hand calcium-binding protein family 0.13 OrthoFinder output from all 47 species
Adi_g081283 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g35874 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g43414 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g43415 No alias calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g11000 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g34152 UNE14 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g36096 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g51502 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g57972 No alias calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g00912 No alias calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g25952 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g00581 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene06621.t1 UNE14, Aspi01Gene06621 calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene07767.t1 Aspi01Gene07767 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene07768.t1 Aspi01Gene07768 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene40089.t1 Aspi01Gene40089 calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene67143.t1 Aspi01Gene67143 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene67147.t1 Aspi01Gene67147 calcium sensor *(CML) & original description: none 0.07 OrthoFinder output from all 47 species
Cba_g04492 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g37370 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.23G032100.1 Ceric.23G032100 calcium sensor *(CML) & original description:... 0.06 OrthoFinder output from all 47 species
Ceric.33G026800.1 Ceric.33G026800 calcium sensor *(CML) & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g39853 No alias calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g00276 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g03528 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g03800 CAM3, acam-3 calcium sensor *(CML) & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g10743 No alias calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g11523 TCH3, ATCAL4 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19027 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g21209 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g27059 TCH2, CML24 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g30390 TCH2, CML24 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008421001 No alias Calcium-binding allergen Ole e 8 OS=Olea europaea 0.02 OrthoFinder output from all 47 species
GSVIVT01033567001 No alias Probable calcium-binding protein CML36 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os01g72080.1 LOC_Os01g72080 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os01g72100.1 LOC_Os01g72100 Probable calcium-binding protein CML10 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
LOC_Os05g31620.1 LOC_Os05g31620 Probable calcium-binding protein CML15 OS=Oryza sativa... 0.05 OrthoFinder output from all 47 species
LOC_Os11g04560.1 LOC_Os11g04560 Probable calcium-binding protein CML36 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Len_g13533 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g54649 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g30167 No alias calcium sensor *(CML) & original description: none 0.05 OrthoFinder output from all 47 species
MA_51891g0010 No alias Probable calcium-binding protein CML10 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Mp5g15630.1 No alias Probable calcium-binding protein CML10 OS=Oryza sativa... 0.05 OrthoFinder output from all 47 species
Msp_g20815 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g01310 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g35662 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g18745 CML41 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g24554 CML23 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g19481 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g33633 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c13_2420V3.1 Pp3c13_2420 EF hand calcium-binding protein family 0.02 OrthoFinder output from all 47 species
Solyc06g068960.1.1 Solyc06g068960 Calcium-binding allergen Ole e 8 OS=Olea europaea... 0.07 OrthoFinder output from all 47 species
Solyc10g079755.1.1 Solyc10g079755 Probable calcium-binding protein CML36 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Spa_g09953 No alias calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g10112 No alias calcium sensor *(CML) & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g14324 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g27602 No alias calcium sensor *(CML) & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g24320 No alias calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g28931 No alias calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g45182 No alias calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e016987_P001 Zm00001e016987 Probable calcium-binding protein CML16 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
Zm00001e018643_P001 Zm00001e018643 Probable calcium-binding protein CML10 OS=Oryza sativa... 0.07 OrthoFinder output from all 47 species
Zm00001e026863_P001 Zm00001e026863 Probable calcium-binding protein CML10 OS=Oryza sativa... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 22 81
IPR002048 EF_hand_dom 91 154
No external refs found!