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  5. Solyc02g090710.3.1

Solyc02g090710.3.1 (Solyc02g090710)


Aliases : Solyc02g090710

Description : transcription factor (REM)


Gene families : OG0000663 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000663_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g090710.3.1

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01022143001 No alias RNA biosynthesis.transcriptional activation.B3... 0.08 OrthoFinder output from all 47 species
Nbi_g34487 No alias REM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e031956_P001 Zm00001e031956 transcription factor (REM) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006486 protein glycosylation IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 167 257
No external refs found!