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  5. Solyc02g090420.2.1

Solyc02g090420.2.1 (Solyc02g090420)


Aliases : Solyc02g090420

Description : no hits & (original description: none)


Gene families : OG0004497 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004497_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g090420.2.1

Target Alias Description ECC score Gene Family Method Actions
AT4G23620 No alias Ribosomal protein L25/Gln-tRNA synthetase,... 0.08 OrthoFinder output from all 47 species
AT5G66860 No alias Ribosomal protein L25/Gln-tRNA synthetase,... 0.04 OrthoFinder output from all 47 species
Ceric.10G035800.1 Ceric.10G035800 component *(bL25m) of large mitoribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Gb_39985 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Gb_39986 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os01g41030.1 LOC_Os01g41030 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os03g41612.1 LOC_Os03g41612 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_10435643g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp5g00210.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Ore_g00335 No alias component *(bL25m) of large mitoribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0020.g008142 No alias component *(bL25m) of large mitoribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Zm00001e012441_P002 Zm00001e012441 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e027819_P001 Zm00001e027819 no hits & (original description: none) 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003697 single-stranded DNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008097 5S rRNA binding IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR020057 Ribosomal_L25_b-dom 153 237
No external refs found!