Aliases : ADOF2, DOF2, Solyc02g090310
Description : transcription factor (DOF)
Gene families : OG0000067 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000067_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00010p00264070 | CDF3,... | RNA biosynthesis.transcriptional activation.C2C2... | 0.02 | OrthoFinder output from all 47 species | |
AMTR_s00119p00099150 | CDF2,... | RNA biosynthesis.transcriptional activation.C2C2... | 0.06 | OrthoFinder output from all 47 species | |
AT1G21340 | No alias | Dof-type zinc finger DNA-binding family protein | 0.02 | OrthoFinder output from all 47 species | |
AT2G37590 | DOF2.4, ATDOF2.4 | DNA binding with one finger 2.4 | 0.04 | OrthoFinder output from all 47 species | |
Als_g04849 | TMO6 | transcription factor *(DOF) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene29615.t1 | CDF3, Aspi01Gene29615 | transcription factor *(DOF) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Cba_g00291 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ceric.14G083700.1 | OBP4, Ceric.14G083700 | transcription factor *(DOF) & original description:... | 0.01 | OrthoFinder output from all 47 species | |
Dcu_g07485 | OBP4 | transcription factor *(DOF) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01005057001 | TMO6 | RNA biosynthesis.transcriptional activation.C2C2... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01007758001 | HCA2, DOF5.6 | RNA biosynthesis.transcriptional activation.C2C2... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01016538001 | OBP3 | RNA biosynthesis.transcriptional activation.C2C2... | 0.01 | OrthoFinder output from all 47 species | |
GSVIVT01021085001 | No alias | RNA biosynthesis.transcriptional activation.C2C2... | 0.03 | OrthoFinder output from all 47 species | |
Gb_23469 | No alias | transcription factor (DOF) | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os02g15350.1 | LOC_Os02g15350 | transcription factor (DOF) | 0.01 | OrthoFinder output from all 47 species | |
LOC_Os03g16850.1 | OBP3, LOC_Os03g16850 | transcription factor (DOF) | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os04g58190.1 | LOC_Os04g58190 | transcription factor (DOF) | 0.01 | OrthoFinder output from all 47 species | |
LOC_Os05g02150.1 | OBP3, LOC_Os05g02150 | transcription factor (DOF) | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os05g36900.1 | LOC_Os05g36900 | transcription factor (DOF) | 0.02 | OrthoFinder output from all 47 species | |
MA_56828g0010 | No alias | transcription factor (DOF) | 0.02 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0022.g008715 | TMO6 | transcription factor *(DOF) & original description: CDS=1-1413 | 0.01 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0024.g008984 | No alias | transcription factor *(DOF) & original description: CDS=332-1984 | 0.01 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0043.g012870 | TMO6 | transcription factor *(DOF) & original description: CDS=1-1464 | 0.01 | OrthoFinder output from all 47 species | |
Solyc05g054510.2.1 | OBP3, Solyc05g054510 | transcription factor (DOF) | 0.11 | OrthoFinder output from all 47 species | |
Zm00001e001988_P001 | TMO6, Zm00001e001988 | transcription factor (DOF) | 0.01 | OrthoFinder output from all 47 species | |
Zm00001e007228_P002 | Zm00001e007228 | transcription factor (DOF) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e010454_P001 | TMO6, Zm00001e010454 | transcription factor (DOF) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e031750_P001 | Zm00001e031750 | transcription factor (DOF) | 0.01 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
BP | GO:0006355 | regulation of DNA-templated transcription | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR003851 | Znf_Dof | 48 | 103 |
No external refs found! |