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  5. Solyc02g089410.3.1

Solyc02g089410.3.1 (Solyc02g089410)


Aliases : Solyc02g089410

Description : E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum (sp|p0ch30|ring1_goshi : 102.0)


Gene families : OG0000101 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000101_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g089410.3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00263520 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder output from all 47 species
AT3G60080 No alias RING/U-box superfamily protein 0.12 OrthoFinder output from all 47 species
AT5G64920 CIP8 COP1-interacting protein 8 0.08 OrthoFinder output from all 47 species
Adi_g012552 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g021049 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g088306 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g107117 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Als_g05596 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08880 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ceric.14G002100.1 Ceric.14G002100 not classified & original description: pacid=50633322... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000571.7 No alias Protein degradation.peptide tagging.Ubiquitin... 0.01 OrthoFinder output from all 47 species
Ehy_g01134 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ehy_g13089 RHC1A not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g15526 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g19575 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
MA_19897g0010 No alias E3 ubiquitin-protein ligase RZF1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_8499g0020 CIP8 E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g25662 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Nbi_g16022 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Sam_g19690 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g22130 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g24681 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Spa_g26018 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0007165 signal transduction IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 258 300
No external refs found!