Solyc02g088330.2.1 (IBS1, Solyc02g088330)

Aliases : IBS1, Solyc02g088330

Description : protein kinase (CDK9)

Gene families : OG0000343 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000343_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc02g088330.2.1
Cluster	HCCA: Cluster_73

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00099p00026630	evm_27.TU.AmTr_v1...	Protein modification.phosphorylation.CMGC kinase...	0.1	OrthoFinder output from all 47 species
AT1G03740	No alias	Protein kinase superfamily protein	0.04	OrthoFinder output from all 47 species
AT1G09600	No alias	Protein kinase superfamily protein	0.1	OrthoFinder output from all 47 species
AT1G74330	No alias	Protein kinase superfamily protein	0.03	OrthoFinder output from all 47 species
AT3G01085	No alias	Protein kinase superfamily protein	0.14	OrthoFinder output from all 47 species
AT4G10010	No alias	Protein kinase superfamily protein	0.11	OrthoFinder output from all 47 species
AT5G39420	cdc2cAt	CDC2C	0.16	OrthoFinder output from all 47 species
AT5G44290	No alias	Protein kinase superfamily protein	0.05	OrthoFinder output from all 47 species
Adi_g013453	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.04	OrthoFinder output from all 47 species
Adi_g089238	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Ala_g14796	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Ala_g15168	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Ala_g32305	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Als_g27681	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Als_g49575	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Als_g62901	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g23603	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Aop_g12616	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Aop_g31114	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Aspi01Gene01405.t1	Aspi01Gene01405	EC_2.7 transferase transferring phosphorus-containing...	0.04	OrthoFinder output from all 47 species
Cba_g14082	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Cba_g20842	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Ceric.08G060900.1	Ceric.08G060900	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Ceric.1Z015500.1	Ceric.1Z015500	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Ceric.37G054700.1	Ceric.37G054700	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Dac_g02350	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Dac_g16207	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Dcu_g01845	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Dcu_g05730	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Ehy_g06172	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Ehy_g13782	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
GSVIVT01011471001	IBS1	Protein modification.phosphorylation.CMGC kinase...	0.1	OrthoFinder output from all 47 species
GSVIVT01014335001	No alias	Protein modification.phosphorylation.CMGC kinase...	0.04	OrthoFinder output from all 47 species
GSVIVT01023220001	No alias	Protein modification.phosphorylation.CMGC kinase...	0.03	OrthoFinder output from all 47 species
GSVIVT01036431001	No alias	Protein modification.phosphorylation.CMGC kinase...	0.04	OrthoFinder output from all 47 species
LOC_Os02g35300.1	LOC_Os02g35300	protein kinase (CDK9)	0.08	OrthoFinder output from all 47 species
LOC_Os03g22700.1	LOC_Os03g22700	protein kinase (CDK9)	0.05	OrthoFinder output from all 47 species
LOC_Os07g40550.1	IBS1, LOC_Os07g40550	protein kinase (CDK9)	0.03	OrthoFinder output from all 47 species
LOC_Os11g13860.1	LOC_Os11g13860	protein kinase (CDK9)	0.11	OrthoFinder output from all 47 species
Lfl_g04049	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Msp_g02474	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Msp_g02482	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.04	OrthoFinder output from all 47 species
Nbi_g03126	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Nbi_g29780	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Pir_g18975	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0054.g014247	No alias	not classified & original description: CDS=745-1773	0.04	OrthoFinder output from all 47 species
Sam_g12387	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.04	OrthoFinder output from all 47 species
Sam_g12432	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Sam_g29547	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Sam_g30154	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Smo141733	No alias	Protein modification.phosphorylation.CMGC kinase...	0.03	OrthoFinder output from all 47 species
Solyc07g053910.3.1	Solyc07g053910	protein kinase (CDK9)	0.04	OrthoFinder output from all 47 species
Spa_g13046	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Spa_g52648	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Tin_g05641	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Zm00001e010695_P004	IBS1, Zm00001e010695	protein kinase (CDK9)	0.01	OrthoFinder output from all 47 species
Zm00001e014840_P002	Zm00001e014840	protein kinase (CDK9)	0.11	OrthoFinder output from all 47 species
Zm00001e016519_P001	Zm00001e016519	protein kinase (CDK9)	0.03	OrthoFinder output from all 47 species
Zm00001e021285_P001	Zm00001e021285	protein kinase (CDK9)	0.1	OrthoFinder output from all 47 species
Zm00001e021863_P001	Zm00001e021863	protein kinase (CDK9)	0.02	OrthoFinder output from all 47 species
Zm00001e026001_P001	Zm00001e026001	protein kinase (CDK9)	0.03	OrthoFinder output from all 47 species
Zm00001e029167_P002	Zm00001e029167	protein kinase (CDK9)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006468	protein phosphorylation	IEA	Interproscan
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016301	kinase activity	None	Extended
BP	GO:0016310	phosphorylation	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003777	microtubule motor activity	IEP	HCCA
MF	GO:0003779	actin binding	IEP	HCCA
MF	GO:0004650	polygalacturonase activity	IEP	HCCA
MF	GO:0005509	calcium ion binding	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
MF	GO:0005543	phospholipid binding	IEP	HCCA
BP	GO:0006629	lipid metabolic process	IEP	HCCA
BP	GO:0007018	microtubule-based movement	IEP	HCCA
MF	GO:0008081	phosphoric diester hydrolase activity	IEP	HCCA
MF	GO:0008092	cytoskeletal protein binding	IEP	HCCA
MF	GO:0016787	hydrolase activity	IEP	HCCA
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000719	Prot_kinase_dom	116	400

External Links

No external refs found!

Solyc02g088330.2.1 (IBS1, Solyc02g088330)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation