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  5. Solyc02g088320.4.1

Solyc02g088320.4.1 (Solyc02g088320)


Aliases : Solyc02g088320

Description : no hits & (original description: none)


Gene families : OG0001902 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001902_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g088320.4.1
Cluster HCCA: Cluster_94

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00082800 evm_27.TU.AmTr_v1... No description available 0.08 OrthoFinder output from all 47 species
AT1G10410 No alias Protein of unknown function (DUF1336) 0.04 OrthoFinder output from all 47 species
AT1G13970 No alias Protein of unknown function (DUF1336) 0.08 OrthoFinder output from all 47 species
Cba_g03348 CW14 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.21G084800.1 Ceric.21G084800 not classified & original description: pacid=50604432... 0.03 OrthoFinder output from all 47 species
GSVIVT01032565001 CW14 No description available 0.03 OrthoFinder output from all 47 species
Msp_g32018 CW14 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g33352 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e002036_P002 Zm00001e002036 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005544 calcium-dependent phospholipid binding IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR009769 EDR2_C 165 406
No external refs found!