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  5. Solyc02g088000.3.1

Solyc02g088000.3.1 (SS2, AtSS2, Solyc02g088000)


Aliases : SS2, AtSS2, Solyc02g088000

Description : starch synthase (SSII)


Gene families : OG0001429 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001429_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g088000.3.1
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
Ehy_g20941 SS2, AtSS2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01011429001 SS2, AtSS2 Carbohydrate metabolism.starch... 0.03 OrthoFinder output from all 47 species
Nbi_g07560 SS2, AtSS2 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
InterPro domains Description Start Stop
IPR013534 Starch_synth_cat_dom 278 520
IPR001296 Glyco_trans_1 579 722
No external refs found!