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  5. Solyc02g087580.3.1

Solyc02g087580.3.1 (Solyc02g087580)


Aliases : Solyc02g087580

Description : no hits & (original description: none)


Gene families : OG0003300 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003300_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g087580.3.1
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00133p00038030 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AT1G27100 No alias Actin cross-linking protein 0.07 OrthoFinder output from all 47 species
AT1G69890 No alias Protein of unknown function (DUF569) 0.09 OrthoFinder output from all 47 species
AT3G28630 No alias Protein of unknown function (DUF569) 0.05 OrthoFinder output from all 47 species
Adi_g117747 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g35608 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.11G041700.1 Ceric.11G041700 not classified & original description: pacid=50595134... 0.04 OrthoFinder output from all 47 species
Dcu_g19168 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g03495 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01020093001 No alias No description available 0.06 OrthoFinder output from all 47 species
GSVIVT01032593001 No alias No description available 0.02 OrthoFinder output from all 47 species
LOC_Os03g58740.1 LOC_Os03g58740 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os07g09384.1 LOC_Os07g09384 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_803749g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp8g10120.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Pir_g24016 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc01g010430.4.1 Solyc01g010430 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc05g006780.3.1 Solyc05g006780 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc05g006790.2.1 Solyc05g006790 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e006033_P002 Zm00001e006033 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e011845_P001 Zm00001e011845 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR007679 DUF569 210 352
IPR007679 DUF569 1 143
IPR007679 DUF569 411 550
No external refs found!