Solyc02g087530.2.1 (Solyc02g087530)

Aliases : Solyc02g087530

Description : AAA-ATPase At3g28610 OS=Arabidopsis thaliana (sp|q9ljj5|aatpb_arath : 390.0)

Gene families : OG0000163 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000163_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc02g087530.2.1

Target	Alias	Description	ECC score	Gene Family Method
Adi_g031480	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Aev_g08283	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g38293	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Dcu_g12773	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species
LOC_Os03g58790.1	LOC_Os03g58790	AAA-ATPase At3g28580 OS=Arabidopsis thaliana...	0.04	OrthoFinder output from all 47 species
LOC_Os07g09420.1	LOC_Os07g09420	AAA-ATPase At3g28580 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0163.g024038	No alias	not classified & original description: CDS=1-1761	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003959	ATPase_AAA_core	179	328

External Links

No external refs found!