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  5. Solyc02g086750.3.1

Solyc02g086750.3.1 (Solyc02g086750)


Aliases : Solyc02g086750

Description : no hits & (original description: none)


Gene families : OG0000954 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000954_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g086750.3.1
Cluster HCCA: Cluster_155

Target Alias Description ECC score Gene Family Method Actions
AT1G48560 No alias unknown protein; Has 75 Blast hits to 71 proteins in 10... 0.03 OrthoFinder output from all 47 species
AT5G27650 No alias Tudor/PWWP/MBT superfamily protein 0.05 OrthoFinder output from all 47 species
Adi_g060541 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g113339 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g04183 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g11396 No alias EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Als_g21623 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30897 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g33310 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g64510 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene63312.t1 Aspi01Gene63312 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g13826 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g20770 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g22385 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g06515 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g22370 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01016344001 No alias Serine/threonine-protein kinase ATM OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
GSVIVT01025624001 No alias No description available 0.05 OrthoFinder output from all 47 species
GSVIVT01032455001 No alias Serine/threonine-protein kinase ATM OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
Len_g24154 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10197194g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g43747 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g16152 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g43036 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g06983 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g46989 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0111.g020704 No alias not classified & original description: CDS=1-3852 0.04 OrthoFinder output from all 47 species
Sam_g14247 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g31146 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
CC GO:0031011 Ino80 complex IEP HCCA
CC GO:0070603 SWI/SNF superfamily-type complex IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
CC GO:0097346 INO80-type complex IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:1904949 ATPase complex IEP HCCA
InterPro domains Description Start Stop
IPR000313 PWWP_dom 145 229
No external refs found!