1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc02g086660.4.1

Solyc02g086660.4.1 (ATDRH1, DRH1, Solyc02g086660)


Aliases : ATDRH1, DRH1, Solyc02g086660

Description : ATP-dependent RNA helicase-like protein DB10 OS=Nicotiana sylvestris (sp|p46942|db10_nicsy : 780.0)


Gene families : OG0000636 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000636_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g086660.4.1

Target Alias Description ECC score Gene Family Method Actions
AT5G14610 No alias DEAD box RNA helicase family protein 0.02 OrthoFinder output from all 47 species
Adi_g057398 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g32867 No alias regulatory RNA helicase *(RH20/RH30) of virus... 0.05 OrthoFinder output from all 47 species
Ceric.06G044900.1 ATDRH1, DRH1,... not classified & original description: pacid=50619771... 0.02 OrthoFinder output from all 47 species
GSVIVT01016847001 No alias RNA processing.RNA splicing.U2-type-intron-specific... 0.03 OrthoFinder output from all 47 species
LOC_Os01g07740.1 ATDRH1, DRH1,... DEAD-box ATP-dependent RNA helicase 14 OS=Oryza sativa... 0.01 OrthoFinder output from all 47 species
Len_g51090 No alias regulatory RNA helicase *(RH20/RH30) of virus... 0.01 OrthoFinder output from all 47 species
Lfl_g05034 ATDRH1, DRH1 not classified & original description: none 0.01 OrthoFinder output from all 47 species
MA_5118g0010 ATDRH1, DRH1 ATP-dependent RNA helicase-like protein DB10... 0.03 OrthoFinder output from all 47 species
Nbi_g14167 ATDRH1, DRH1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g29066 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Smo98552 No alias RNA processing.RNA splicing.U2-type-intron-specific... 0.02 OrthoFinder output from all 47 species
Solyc01g057760.4.1 Solyc01g057760 DEAD-box ATP-dependent RNA helicase 40 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
Tin_g09726 No alias regulatory RNA helicase *(RH20/RH30) of virus... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001650 Helicase_C 383 492
IPR001202 WW_dom 21 51
IPR011545 DEAD/DEAH_box_helicase_dom 178 346
No external refs found!