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  5. Solyc02g086150.4.1

Solyc02g086150.4.1 (Solyc02g086150)


Aliases : Solyc02g086150

Description : component CRS2 of CRS2-CAF plastidial RNA splicing factor complexes


Gene families : OG0001693 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001693_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Solyc02g086150.4.1

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene49461.t1 Aspi01Gene49461 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g12317 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
GSVIVT01008257001 No alias RNA processing.organelle machineries.RNA... 0.07 OrthoFinder output from all 47 species
LOC_Os01g49900.1 LOC_Os01g49900 cPTH plastidial RNA splicing factor 0.03 OrthoFinder output from all 47 species
Len_g09494 No alias plastidial RNA splicing factor *(cPTH)) & original... 0.03 OrthoFinder output from all 47 species
Msp_g05477 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g08308 No alias plastidial RNA splicing factor *(cPTH)) & original... 0.06 OrthoFinder output from all 47 species
Ppi_g17021 No alias plastidial RNA splicing factor *(cPTH)) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001328 Pept_tRNA_hydro 50 224
No external refs found!