Aliases : U1-70K, U1SNRNP, Solyc02g085420
Description : component U1-70K of U1 small nuclear ribonucleoprotein particle (snRNP)
Gene families : OG0003392 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003392_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00059p00067090 | U1-70K, U1SNRNP,... | RNA processing.RNA splicing.U2-type-intron-specific... | 0.06 | OrthoFinder output from all 47 species | |
AT3G50670 | U1-70K, U1SNRNP | U1 small nuclear ribonucleoprotein-70K | 0.04 | OrthoFinder output from all 47 species | |
Adi_g056623 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Als_g10647 | U1-70K, U1SNRNP | component *(U1-70K) of U1 snRNP complex & original... | 0.07 | OrthoFinder output from all 47 species | |
Aob_g13725 | U1-70K, U1SNRNP | component *(U1-70K) of U1 snRNP complex & original... | 0.03 | OrthoFinder output from all 47 species | |
Aop_g04623 | U1-70K, U1SNRNP | component *(U1-70K) of U1 snRNP complex & original... | 0.05 | OrthoFinder output from all 47 species | |
Azfi_s0390.g067692 | U1-70K, U1SNRNP | component *(U1-70K) of U1 snRNP complex & original... | 0.05 | OrthoFinder output from all 47 species | |
Azfi_s2260.g110011 | U1-70K, U1SNRNP | component *(U1-70K) of U1 snRNP complex & original... | 0.04 | OrthoFinder output from all 47 species | |
Cba_g60536 | U1-70K, U1SNRNP | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ceric.01G033200.1 | U1-70K, U1SNRNP,... | component *(U1-70K) of U1 snRNP complex & original... | 0.05 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00001333.27 | U1-70K, U1SNRNP | RNA processing.RNA splicing.U2-type-intron-specific... | 0.04 | OrthoFinder output from all 47 species | |
Cre16.g656250 | U1-70K, U1SNRNP | RNA processing.RNA splicing.U2-type-intron-specific... | 0.04 | OrthoFinder output from all 47 species | |
Dcu_g10772 | U1-70K, U1SNRNP | component *(U1-70K) of U1 snRNP complex & original... | 0.05 | OrthoFinder output from all 47 species | |
Dcu_g24491 | U1-70K, U1SNRNP | component *(U1-70K) of U1 snRNP complex & original... | 0.05 | OrthoFinder output from all 47 species | |
GSVIVT01018981001 | U1-70K, U1SNRNP | RNA processing.RNA splicing.U2-type-intron-specific... | 0.06 | OrthoFinder output from all 47 species | |
Gb_32834 | U1-70K, U1SNRNP | U1 small nuclear ribonucleoprotein 70 kDa OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os10g02630.1 | U1-70K, U1SNRNP,... | component U1-70K of U1 small nuclear ribonucleoprotein... | 0.04 | OrthoFinder output from all 47 species | |
Len_g19673 | U1-70K, U1SNRNP | component *(U1-70K) of U1 snRNP complex & original... | 0.05 | OrthoFinder output from all 47 species | |
MA_10426294g0010 | U1-70K, U1SNRNP | component U1-70K of U1 small nuclear ribonucleoprotein... | 0.02 | OrthoFinder output from all 47 species | |
Pir_g35785 | U1-70K, U1SNRNP | component *(U1-70K) of U1 snRNP complex & original... | 0.02 | OrthoFinder output from all 47 species | |
Pnu_g03596 | U1-70K, U1SNRNP | component *(U1-70K) of U1 snRNP complex & original... | 0.03 | OrthoFinder output from all 47 species | |
Pnu_g11483 | U1-70K, U1SNRNP | component *(U1-70K) of U1 snRNP complex & original... | 0.06 | OrthoFinder output from all 47 species | |
Smo58751 | U1-70K, U1SNRNP | RNA processing.RNA splicing.U2-type-intron-specific... | 0.03 | OrthoFinder output from all 47 species | |
Spa_g21778 | U1-70K, U1SNRNP | component *(U1-70K) of U1 snRNP complex & original... | 0.02 | OrthoFinder output from all 47 species | |
Spa_g26650 | U1-70K, U1SNRNP | component *(U1-70K) of U1 snRNP complex & original... | 0.03 | OrthoFinder output from all 47 species | |
Spa_g56473 | U1-70K, U1SNRNP | component *(U1-70K) of U1 snRNP complex & original... | 0.03 | OrthoFinder output from all 47 species | |
Tin_g11433 | U1-70K, U1SNRNP | component *(U1-70K) of U1 snRNP complex & original... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e012949_P002 | U1-70K, U1SNRNP,... | component U1-70K of U1 small nuclear ribonucleoprotein... | 0.09 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | HCCA |
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
BP | GO:0006396 | RNA processing | IEP | HCCA |
MF | GO:0008270 | zinc ion binding | IEP | HCCA |
BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
BP | GO:0018208 | peptidyl-proline modification | IEP | HCCA |
MF | GO:0043167 | ion binding | IEP | HCCA |
MF | GO:0043169 | cation binding | IEP | HCCA |
MF | GO:0046872 | metal ion binding | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
No external refs found! |