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  5. Solyc02g085130.4.1

Solyc02g085130.4.1 (TLP2, AtTLP2, Solyc02g085130)


Aliases : TLP2, AtTLP2, Solyc02g085130

Description : transcription factor (TUB)


Gene families : OG0000251 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000251_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g085130.4.1
Cluster HCCA: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00040910 TLP10, AtTLP10,... RNA biosynthesis.transcriptional activation.TUB... 0.02 OrthoFinder output from all 47 species
AT3G06380 TLP9, ATTLP9 tubby-like protein 9 0.03 OrthoFinder output from all 47 species
AT5G18680 AtTLP11, TLP11 tubby like protein 11 0.02 OrthoFinder output from all 47 species
Adi_g076987 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g110282 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g115192 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g12652 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g01271 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g11649 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0028.g023784 AtTLP3, TLP3 TUB-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.39G011000.1 AtTLP3, TLP3,... TUB-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g10365 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g12682 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g09015 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g30776 AtTLP1, TLP1 TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01010999001 AtTLP3, TLP3 RNA biosynthesis.transcriptional activation.TUB... 0.04 OrthoFinder output from all 47 species
GSVIVT01034528001 AtTLP1, TLP1 RNA biosynthesis.transcriptional activation.TUB... 0.03 OrthoFinder output from all 47 species
LOC_Os02g47640.1 TLP2, AtTLP2,... transcription factor (TUB) 0.04 OrthoFinder output from all 47 species
LOC_Os05g48670.1 AtTLP7, TLP7,... transcription factor (TUB) 0.02 OrthoFinder output from all 47 species
Len_g15560 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07779 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g12650 TLP10, AtTLP10 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_132704g0010 AtTLP3, TLP3 transcription factor (TUB) 0.03 OrthoFinder output from all 47 species
Msp_g12641 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g03652 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g05272 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g03852 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g42650 AtTLP1, TLP1 TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g01637 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g11738 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g02087 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g04396 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g50956 No alias TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Smo230435 AtTLP3, TLP3 RNA biosynthesis.transcriptional activation.TUB... 0.03 OrthoFinder output from all 47 species
Smo85745 AtTLP3, TLP3 RNA biosynthesis.transcriptional activation.TUB... 0.03 OrthoFinder output from all 47 species
Solyc10g046970.2.1 TLP10, AtTLP10,... transcription factor (TUB) 0.04 OrthoFinder output from all 47 species
Spa_g18566 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g01734 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e001672_P001 AtTLP3, TLP3,... transcription factor (TUB) 0.05 OrthoFinder output from all 47 species
Zm00001e019166_P001 TLP10, AtTLP10,... transcription factor (TUB) 0.03 OrthoFinder output from all 47 species
Zm00001e032131_P001 AtTLP7, TLP7,... transcription factor (TUB) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009606 tropism IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010274 hydrotropism IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 53 104
IPR000007 Tubby_C 116 406
No external refs found!