LOC_Os03g23950.1

Description : large subunit beta of AP-1 trans-Golgi network cargo adaptor complex. large subunit beta of AP-2 cargo adaptor complex

Gene families : OG_01_0004656 (Archaeplastida) Phylogenetic Tree(s): OG_01_0004656_tree ,
OG_02_0005385 (LandPlants) Phylogenetic Tree(s): OG_02_0005385_tree ,
OG_03_0007627 (SeedPlants) Phylogenetic Tree(s): OG_03_0007627_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os03g23950.1
Cluster	HCCA: Cluster_118

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00102p00095780	evm_27.TU.AmTr_v1...	Vesicle trafficking.clathrin coated vesicle (CCV)...	0.06	Archaeplastida
AT4G23460	No alias	Adaptin family protein	0.15	Archaeplastida
Cpa\|evm.model.tig00020592.38	No alias	Vesicle trafficking.clathrin coated vesicle (CCV)...	0.06	Archaeplastida
Cre11.g478156	No alias	Vesicle trafficking.clathrin coated vesicle (CCV)...	0.04	Archaeplastida
GSVIVT01019391001	No alias	Vesicle trafficking.clathrin coated vesicle (CCV)...	0.2	Archaeplastida
Gb_11857	No alias	large subunit beta of AP-1 trans-Golgi network cargo...	0.09	Archaeplastida
MA_10434151g0010	No alias	large subunit beta of AP-1 trans-Golgi network cargo...	0.07	Archaeplastida
MA_10436050g0010	No alias	Beta-adaptin-like protein C OS=Arabidopsis thaliana...	0.09	Archaeplastida
MA_83634g0010	No alias	no hits & (original description: none)	0.11	Archaeplastida
Mp1g25810.1	No alias	large subunit beta of AP-1 trans-Golgi network cargo...	0.17	Archaeplastida
Pp3c14_2460V3.1	No alias	Adaptin family protein	0.11	Archaeplastida
Pp3c1_19340V3.1	No alias	Adaptin family protein	0.09	Archaeplastida
Pp3c2_18140V3.1	No alias	Adaptin family protein	0.08	Archaeplastida
Smo269184	No alias	Vesicle trafficking.clathrin coated vesicle (CCV)...	0.14	Archaeplastida
Solyc08g081320.3.1	No alias	large subunit beta of AP-1 trans-Golgi network cargo...	0.12	Archaeplastida
Zm00001e001693_P001	No alias	large subunit beta of AP-1 trans-Golgi network cargo...	0.3	Archaeplastida
Zm00001e038184_P001	No alias	large subunit beta of AP-1 trans-Golgi network cargo...	0.3	Archaeplastida
AMTR_s00102p00095780	evm_27.TU.AmTr_v1...	Vesicle trafficking.clathrin coated vesicle (CCV)...	0.06	LandPlants
AT4G23460	No alias	Adaptin family protein	0.14	LandPlants
GSVIVT01019391001	No alias	Vesicle trafficking.clathrin coated vesicle (CCV)...	0.2	LandPlants
Gb_11857	No alias	large subunit beta of AP-1 trans-Golgi network cargo...	0.08	LandPlants
MA_10434151g0010	No alias	large subunit beta of AP-1 trans-Golgi network cargo...	0.06	LandPlants
MA_10436050g0010	No alias	Beta-adaptin-like protein C OS=Arabidopsis thaliana...	0.09	LandPlants
MA_83634g0010	No alias	no hits & (original description: none)	0.1	LandPlants
Mp1g25810.1	No alias	large subunit beta of AP-1 trans-Golgi network cargo...	0.17	LandPlants
Pp3c14_2460V3.1	No alias	Adaptin family protein	0.1	LandPlants
Pp3c1_19340V3.1	No alias	Adaptin family protein	0.09	LandPlants
Pp3c2_18140V3.1	No alias	Adaptin family protein	0.08	LandPlants
Smo269184	No alias	Vesicle trafficking.clathrin coated vesicle (CCV)...	0.14	LandPlants
Solyc08g081320.3.1	No alias	large subunit beta of AP-1 trans-Golgi network cargo...	0.12	LandPlants
Zm00001e001693_P001	No alias	large subunit beta of AP-1 trans-Golgi network cargo...	0.31	LandPlants
Zm00001e038184_P001	No alias	large subunit beta of AP-1 trans-Golgi network cargo...	0.3	LandPlants
AMTR_s00102p00095780	evm_27.TU.AmTr_v1...	Vesicle trafficking.clathrin coated vesicle (CCV)...	0.06	SeedPlants
AT4G23460	No alias	Adaptin family protein	0.14	SeedPlants
GSVIVT01019391001	No alias	Vesicle trafficking.clathrin coated vesicle (CCV)...	0.2	SeedPlants
Gb_11857	No alias	large subunit beta of AP-1 trans-Golgi network cargo...	0.08	SeedPlants
MA_10434151g0010	No alias	large subunit beta of AP-1 trans-Golgi network cargo...	0.06	SeedPlants
Solyc08g081320.3.1	No alias	large subunit beta of AP-1 trans-Golgi network cargo...	0.12	SeedPlants
Zm00001e001693_P001	No alias	large subunit beta of AP-1 trans-Golgi network cargo...	0.29	SeedPlants
Zm00001e038184_P001	No alias	large subunit beta of AP-1 trans-Golgi network cargo...	0.3	SeedPlants

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	ion transport	None	Extended
BP	GO:0006820	anion transport	None	Extended
BP	GO:0006886	intracellular protein transport	IEA	Interproscan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0015833	peptide transport	None	Extended
BP	GO:0016192	vesicle-mediated transport	IEA	Interproscan
CC	GO:0030117	membrane coat	IEA	Interproscan
CC	GO:0030119	AP-type membrane coat adaptor complex	None	Extended
CC	GO:0030131	clathrin adaptor complex	IEA	Interproscan
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0042886	amide transport	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR008152	Clathrin_a/b/g-adaptin_app_Ig	680	775
IPR015151	B-adaptin_app_sub_C	787	895
IPR002553	Clathrin/coatomer_adapt-like_N	15	533

External Links

No external refs found!

LOC_Os03g23950.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation