LOC_Os03g23950.1


Description : large subunit beta of AP-1 trans-Golgi network cargo adaptor complex. large subunit beta of AP-2 cargo adaptor complex


Gene families : OG_01_0004656 (Archaeplastida) Phylogenetic Tree(s): OG_01_0004656_tree ,
OG_02_0005385 (LandPlants) Phylogenetic Tree(s): OG_02_0005385_tree ,
OG_03_0007627 (SeedPlants) Phylogenetic Tree(s): OG_03_0007627_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g23950.1
Cluster HCCA: Cluster_118

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00102p00095780 evm_27.TU.AmTr_v1... Vesicle trafficking.clathrin coated vesicle (CCV)... 0.06 Archaeplastida
AT4G23460 No alias Adaptin family protein 0.15 Archaeplastida
Cpa|evm.model.tig00020592.38 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.06 Archaeplastida
Cre11.g478156 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.04 Archaeplastida
GSVIVT01019391001 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.2 Archaeplastida
Gb_11857 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.09 Archaeplastida
MA_10434151g0010 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.07 Archaeplastida
MA_10436050g0010 No alias Beta-adaptin-like protein C OS=Arabidopsis thaliana... 0.09 Archaeplastida
MA_83634g0010 No alias no hits & (original description: none) 0.11 Archaeplastida
Mp1g25810.1 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.17 Archaeplastida
Pp3c14_2460V3.1 No alias Adaptin family protein 0.11 Archaeplastida
Pp3c1_19340V3.1 No alias Adaptin family protein 0.09 Archaeplastida
Pp3c2_18140V3.1 No alias Adaptin family protein 0.08 Archaeplastida
Smo269184 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.14 Archaeplastida
Solyc08g081320.3.1 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.12 Archaeplastida
Zm00001e001693_P001 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.3 Archaeplastida
Zm00001e038184_P001 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.3 Archaeplastida
AMTR_s00102p00095780 evm_27.TU.AmTr_v1... Vesicle trafficking.clathrin coated vesicle (CCV)... 0.06 LandPlants
AT4G23460 No alias Adaptin family protein 0.14 LandPlants
GSVIVT01019391001 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.2 LandPlants
Gb_11857 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.08 LandPlants
MA_10434151g0010 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.06 LandPlants
MA_10436050g0010 No alias Beta-adaptin-like protein C OS=Arabidopsis thaliana... 0.09 LandPlants
MA_83634g0010 No alias no hits & (original description: none) 0.1 LandPlants
Mp1g25810.1 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.17 LandPlants
Pp3c14_2460V3.1 No alias Adaptin family protein 0.1 LandPlants
Pp3c1_19340V3.1 No alias Adaptin family protein 0.09 LandPlants
Pp3c2_18140V3.1 No alias Adaptin family protein 0.08 LandPlants
Smo269184 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.14 LandPlants
Solyc08g081320.3.1 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.12 LandPlants
Zm00001e001693_P001 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.31 LandPlants
Zm00001e038184_P001 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.3 LandPlants
AMTR_s00102p00095780 evm_27.TU.AmTr_v1... Vesicle trafficking.clathrin coated vesicle (CCV)... 0.06 SeedPlants
AT4G23460 No alias Adaptin family protein 0.14 SeedPlants
GSVIVT01019391001 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.2 SeedPlants
Gb_11857 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.08 SeedPlants
MA_10434151g0010 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.06 SeedPlants
Solyc08g081320.3.1 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.12 SeedPlants
Zm00001e001693_P001 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.29 SeedPlants
Zm00001e038184_P001 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.3 SeedPlants

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
CC GO:0030117 membrane coat IEA Interproscan
CC GO:0030131 clathrin adaptor complex IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR008152 Clathrin_a/b/g-adaptin_app_Ig 680 775
IPR015151 B-adaptin_app_sub_C 787 895
IPR002553 Clathrin/coatomer_adapt-like_N 15 533
No external refs found!