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  5. Solyc02g083270.4.1

Solyc02g083270.4.1 (Solyc02g083270)


Aliases : Solyc02g083270

Description : LTO1 protein involved in PS-II assembly. thiol-disulfide oxidoreductase (LTO1)


Gene families : OG0004555 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004555_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g083270.4.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00178450 evm_27.TU.AmTr_v1... Protein modification.disulfide bond... 0.04 OrthoFinder output from all 47 species
Aev_g06675 No alias thiol-disulfide oxidoreductase *(LTO1) & original... 0.02 OrthoFinder output from all 47 species
Cre12.g493150 No alias Protein modification.disulfide bond... 0.02 OrthoFinder output from all 47 species
Dcu_g19068 No alias thiol-disulfide oxidoreductase *(LTO1) & original... 0.02 OrthoFinder output from all 47 species
Gb_11132 No alias LTO1 protein involved in PS-II assembly. thiol-disulfide... 0.02 OrthoFinder output from all 47 species
LOC_Os03g03949.2 LOC_Os03g03949 LTO1 protein involved in PS-II assembly. thiol-disulfide... 0.03 OrthoFinder output from all 47 species
Lfl_g08948 No alias thiol-disulfide oxidoreductase *(LTO1) & original... 0.03 OrthoFinder output from all 47 species
MA_10432388g0010 No alias LTO1 protein involved in PS-II assembly. thiol-disulfide... 0.03 OrthoFinder output from all 47 species
Ore_g07405 No alias thiol-disulfide oxidoreductase *(LTO1) & original... 0.02 OrthoFinder output from all 47 species
Pir_g09423 No alias thiol-disulfide oxidoreductase *(LTO1) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006721 terpenoid metabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
MF GO:0008685 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity IEP HCCA
BP GO:0016114 terpenoid biosynthetic process IEP HCCA
MF GO:0016849 phosphorus-oxygen lyase activity IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR012932 VKOR 80 211
No external refs found!