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  5. Solyc02g081700.1.1

Solyc02g081700.1.1 (PAC1, Solyc02g081700)


Aliases : PAC1, Solyc02g081700

Description : component alpha type-3 of 26S proteasome


Gene families : OG0004222 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004222_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g081700.1.1
Cluster HCCA: Cluster_96

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00168180 PAC1,... Protein degradation.26S proteasome.20S core... 0.03 OrthoFinder output from all 47 species
Ala_g13312 PAC1 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.07 OrthoFinder output from all 47 species
Als_g05458 PAC1 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Ceric.04G045700.1 PAC1, Ceric.04G045700 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.08 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020965.21 PAC1 Protein degradation.26S proteasome.20S core... 0.06 OrthoFinder output from all 47 species
Cre10.g418100 PAC1 Protein degradation.26S proteasome.20S core... 0.15 OrthoFinder output from all 47 species
GSVIVT01026133001 PAC1 No description available 0.1 OrthoFinder output from all 47 species
Gb_31719 PAC1 component alpha type-3 of 26S proteasome 0.03 OrthoFinder output from all 47 species
LOC_Os06g07140.1 PAC1, LOC_Os06g07140 component alpha type-3 of 26S proteasome 0.04 OrthoFinder output from all 47 species
Lfl_g21510 PAC1 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
MA_474079g0010 PAC1 component alpha type-3 of 26S proteasome 0.06 OrthoFinder output from all 47 species
Mp1g16770.1 PAC1 component alpha type-3 of 26S proteasome 0.15 OrthoFinder output from all 47 species
Msp_g25851 PAC1 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.04 OrthoFinder output from all 47 species
Nbi_g03431 PAC1 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.1 OrthoFinder output from all 47 species
Ore_g03953 PAC1 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Pir_g11576 PAC1 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Spa_g01619 PAC1 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.09 OrthoFinder output from all 47 species
Spa_g48205 PAC1 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.05 OrthoFinder output from all 47 species
Spa_g55948 PAC1 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.05 OrthoFinder output from all 47 species
Tin_g00589 PAC1 EC_3.4 hydrolase acTing on peptide bond (peptidase) &... 0.06 OrthoFinder output from all 47 species
Zm00001e030110_P001 PAC1, Zm00001e030110 component alpha type-3 of 26S proteasome 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEA Interproscan
MF GO:0004298 threonine-type endopeptidase activity IEA Interproscan
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA Interproscan
CC GO:0019773 proteasome core complex, alpha-subunit complex IEA Interproscan
BP GO:0051603 proteolysis involved in protein catabolic process IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000426 Proteasome_asu_N 5 27
IPR001353 Proteasome_sua/b 30 214
No external refs found!