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  5. LOC_Os03g22690.1

LOC_Os03g22690.1


Description : NUP93 scaffold nucleoporin of nuclear pore complex


Gene families : OG_01_0004324 (Archaeplastida) Phylogenetic Tree(s): OG_01_0004324_tree ,
OG_02_0005232 (LandPlants) Phylogenetic Tree(s): OG_02_0005232_tree ,
OG_03_0005542 (SeedPlants) Phylogenetic Tree(s): OG_03_0005542_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g22690.1
Cluster HCCA: Cluster_262

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00107p00047780 evm_27.TU.AmTr_v1... Protein translocation.nucleus.nucleocytoplasmic... 0.04 Archaeplastida
AT3G57350 No alias Nucleoporin interacting component (Nup93/Nic96-like)... 0.03 Archaeplastida
Cre17.g717800 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.03 Archaeplastida
Gb_32484 No alias NUP93 scaffold nucleoporin of nuclear pore complex 0.05 Archaeplastida
MA_10430439g0010 No alias No annotation 0.02 Archaeplastida
MA_10435434g0020 No alias NUP93 scaffold nucleoporin of nuclear pore complex 0.05 Archaeplastida
MA_273054g0010 No alias NUP93 scaffold nucleoporin of nuclear pore complex 0.03 Archaeplastida
Mp2g23730.1 No alias NUP93 scaffold nucleoporin of nuclear pore complex 0.07 Archaeplastida
Pp3c6_19740V3.1 No alias Nucleoporin interacting component (Nup93/Nic96-like)... 0.04 Archaeplastida
Smo177656 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.03 Archaeplastida
Solyc04g016240.3.1 No alias NUP93 scaffold nucleoporin of nuclear pore complex 0.07 Archaeplastida
Zm00001e001657_P002 No alias NUP93 scaffold nucleoporin of nuclear pore complex 0.07 Archaeplastida
AMTR_s00107p00047780 evm_27.TU.AmTr_v1... Protein translocation.nucleus.nucleocytoplasmic... 0.04 LandPlants
AT2G41620 No alias Nucleoporin interacting component (Nup93/Nic96-like)... 0.02 LandPlants
AT3G57350 No alias Nucleoporin interacting component (Nup93/Nic96-like)... 0.03 LandPlants
Gb_32484 No alias NUP93 scaffold nucleoporin of nuclear pore complex 0.04 LandPlants
MA_10435434g0020 No alias NUP93 scaffold nucleoporin of nuclear pore complex 0.04 LandPlants
Mp2g23730.1 No alias NUP93 scaffold nucleoporin of nuclear pore complex 0.06 LandPlants
Pp3c6_19740V3.1 No alias Nucleoporin interacting component (Nup93/Nic96-like)... 0.04 LandPlants
Solyc04g016240.3.1 No alias NUP93 scaffold nucleoporin of nuclear pore complex 0.05 LandPlants
Zm00001e001657_P002 No alias NUP93 scaffold nucleoporin of nuclear pore complex 0.06 LandPlants
AMTR_s00107p00047780 evm_27.TU.AmTr_v1... Protein translocation.nucleus.nucleocytoplasmic... 0.04 SeedPlants
AT2G41620 No alias Nucleoporin interacting component (Nup93/Nic96-like)... 0.02 SeedPlants
AT3G57350 No alias Nucleoporin interacting component (Nup93/Nic96-like)... 0.03 SeedPlants
Gb_32484 No alias NUP93 scaffold nucleoporin of nuclear pore complex 0.04 SeedPlants
MA_10435434g0020 No alias NUP93 scaffold nucleoporin of nuclear pore complex 0.04 SeedPlants
Solyc04g016240.3.1 No alias NUP93 scaffold nucleoporin of nuclear pore complex 0.04 SeedPlants
Zm00001e001657_P002 No alias NUP93 scaffold nucleoporin of nuclear pore complex 0.06 SeedPlants

Type GO Term Name Evidence Source
CC GO:0005643 nuclear pore IEA Interproscan
MF GO:0017056 structural constituent of nuclear pore IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR007231 Nucleoporin_int_Nup93/Nic96 255 856
No external refs found!