Solyc02g080740.3.1 (Solyc02g080740)


Aliases : Solyc02g080740

Description : G2-like GARP transcription factor


Gene families : OG0000036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g080740.3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00106p00040830 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.05 OrthoFinder output from all 47 species
AMTR_s00131p00063460 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.06 OrthoFinder output from all 47 species
AT1G32240 KAN2 Homeodomain-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G02060 No alias Homeodomain-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G06020 No alias Homeodomain-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT2G38300 No alias myb-like HTH transcriptional regulator family protein 0.03 OrthoFinder output from all 47 species
AT2G40260 No alias Homeodomain-like superfamily protein 0.05 OrthoFinder output from all 47 species
AT4G04605 No alias No description available 0.07 OrthoFinder output from all 47 species
Adi_g008111 No alias KANAdi-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g025721 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Adi_g080178 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Adi_g081643 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aev_g06650 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aev_g08301 No alias transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g39180 No alias transcription factor *(CLAUSA) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g08342 KAN, KAN1 KANADI-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g10756 No alias transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g12852 PHR1, AtPHR1 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ala_g14535 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Als_g04915 KAN, KAN1 KANADI-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07758 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Als_g15748 No alias transcription factor *(CLAUSA) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g47265 KAN, KAN1 KANADI-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g01763 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aob_g11673 No alias GARP subgroup PHL transcription factor & original... 0.01 OrthoFinder output from all 47 species
Aop_g06318 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aop_g38602 PHR1, AtPHR1 GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene14328.t1 KAN, KAN1,... KANADI-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene35964.t1 Aspi01Gene35964 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene42025.t1 HRS1, Aspi01Gene42025 GARP subgroup HHO transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene65261.t1 Aspi01Gene65261 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0003.g007457 PHR1, AtPHR1 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0089.g042590 No alias not classified & original description: CDS=1-831 0.02 OrthoFinder output from all 47 species
Azfi_s0121.g046895 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.11G027500.1 Ceric.11G027500 transcription factor *(CLAUSA) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.12G062400.1 Ceric.12G062400 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.13G021000.1 KAN, KAN1,... KANADI-type transcription factor & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.21G076700.1 Ceric.21G076700 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.22G040100.1 Ceric.22G040100 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.31G067100.1 Ceric.31G067100 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.33G006800.1 Ceric.33G006800 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dac_g23034 No alias transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g38078 No alias KANADI-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g03890 KAN2 KANADI-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g04642 No alias transcription factor *(CLAUSA) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g04782 No alias transcription factor *(CLAUSA) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g08815 KAN2 KANADI-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g26187 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Dde_g21452 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Dde_g23417 KAN, KAN1 KANADI-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g48326 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ehy_g00938 No alias transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g08285 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ehy_g15807 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ehy_g21970 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01005342001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 OrthoFinder output from all 47 species
GSVIVT01012707001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01013085001 KAN2 RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
GSVIVT01021225001 No alias Putative Myb family transcription factor At1g14600... 0.06 OrthoFinder output from all 47 species
GSVIVT01033381001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
Gb_08427 KAN, KAN1 G2-like GARP transcription factor 0.04 OrthoFinder output from all 47 species
Gb_17469 KAN, KAN1 G2-like GARP transcription factor 0.06 OrthoFinder output from all 47 species
Gb_27262 No alias G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Gb_40510 No alias G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
LOC_Os02g07170.1 LOC_Os02g07170 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os02g14490.1 LOC_Os02g14490 Putative Myb family transcription factor At1g14600... 0.04 OrthoFinder output from all 47 species
LOC_Os06g35140.1 LOC_Os06g35140 G2-like GARP transcription factor 0.04 OrthoFinder output from all 47 species
LOC_Os08g06370.1 KAN2, LOC_Os08g06370 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os08g33750.1 LOC_Os08g33750 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os11g01480.1 LOC_Os11g01480 Putative Myb family transcription factor At1g14600... 0.06 OrthoFinder output from all 47 species
LOC_Os12g01490.1 LOC_Os12g01490 Putative Myb family transcription factor At1g14600... 0.06 OrthoFinder output from all 47 species
Len_g00522 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Len_g21596 PHR1, AtPHR1 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
MA_201937g0010 APL, WDY G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
MA_28188g0010 No alias G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
MA_52379g0010 No alias G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
MA_6619111g0010 KAN, KAN1 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
MA_8183372g0010 No alias G2-like GARP transcription factor 0.05 OrthoFinder output from all 47 species
Mp4g08700.1 No alias G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Msp_g25933 No alias transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g31008 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Nbi_g15270 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g24259 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ore_g10253 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ore_g17637 No alias transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g37615 KAN, KAN1 KANADI-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g43901 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g11277 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Pir_g13488 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Pir_g29411 PHL1 transcription factor *(PHR1) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g08186 No alias transcription factor *(CLAUSA) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g11923 KAN, KAN1 KANADI-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g13922 No alias transcription factor *(CLAUSA) & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c23_8710V3.1 Pp3c23_8710 myb-like HTH transcriptional regulator family protein 0.01 OrthoFinder output from all 47 species
Ppi_g41564 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0019.g007778 No alias not classified & original description: CDS=1-762 0.03 OrthoFinder output from all 47 species
Sam_g15241 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sam_g30015 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo405704 KAN4, ATS RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
Solyc02g076670.3.1 Solyc02g076670 Putative Myb family transcription factor At1g14600... 0.03 OrthoFinder output from all 47 species
Solyc03g006150.2.1 Solyc03g006150 Putative Myb family transcription factor At1g14600... 0.05 OrthoFinder output from all 47 species
Solyc06g066180.4.1 Solyc06g066180 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Solyc07g045000.4.1 Solyc07g045000 Putative Myb family transcription factor At1g14600... 0.06 OrthoFinder output from all 47 species
Solyc10g078720.2.1 Solyc10g078720 G2-like GARP transcription factor 0.04 OrthoFinder output from all 47 species
Solyc10g085620.2.1 Solyc10g085620 G2-like GARP transcription factor 0.04 OrthoFinder output from all 47 species
Solyc12g006280.3.1 Solyc12g006280 Putative Myb family transcription factor At1g14600... 0.07 OrthoFinder output from all 47 species
Tin_g12933 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Zm00001e005797_P001 KAN4, ATS, Zm00001e005797 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e009294_P001 Zm00001e009294 Putative Myb family transcription factor At1g14600... 0.03 OrthoFinder output from all 47 species
Zm00001e014339_P001 Zm00001e014339 Putative Myb family transcription factor At1g14600... 0.01 OrthoFinder output from all 47 species
Zm00001e015514_P001 KAN2, Zm00001e015514 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e018018_P002 KAN4, ATS, Zm00001e018018 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e030689_P002 Zm00001e030689 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e037131_P001 Zm00001e037131 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e037761_P001 Zm00001e037761 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e039024_P001 Zm00001e039024 G2-like GARP transcription factor 0.01 OrthoFinder output from all 47 species
Zm00001e040203_P001 KAN2, Zm00001e040203 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e041868_P002 Zm00001e041868 G2-like GARP transcription factor 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0015267 channel activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!