Aliases : Solyc02g080730
Description : G2-like GARP transcription factor
Gene families : OG0000036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Solyc02g080730.2.1 | |
Cluster | HCCA: Cluster_116 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00044p00042560 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.MYB... | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00048p00192390 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.MYB... | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00119p00095480 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.MYB... | 0.03 | OrthoFinder output from all 47 species | |
AT1G32240 | KAN2 | Homeodomain-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
AT2G02060 | No alias | Homeodomain-like superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
AT2G06020 | No alias | Homeodomain-like superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
AT2G40260 | No alias | Homeodomain-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
AT4G04605 | No alias | No description available | 0.05 | OrthoFinder output from all 47 species | |
AT5G06800 | No alias | myb-like HTH transcriptional regulator family protein | 0.03 | OrthoFinder output from all 47 species | |
Adi_g023997 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
Adi_g054713 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
Adi_g108057 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Adi_g114670 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aev_g08301 | No alias | transcription factor *(CLAUSA) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ala_g14535 | No alias | GARP subgroup PHL transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
Als_g01879 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
Als_g15748 | No alias | transcription factor *(CLAUSA) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g47265 | KAN, KAN1 | KANADI-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aob_g11673 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
Azfi_s0078.g038309 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.12G062400.1 | Ceric.12G062400 | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.22G040100.1 | Ceric.22G040100 | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
Dac_g20781 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
Dac_g27691 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g03890 | KAN2 | KANADI-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Dde_g16600 | No alias | transcription factor *(CLAUSA) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dde_g23417 | KAN, KAN1 | KANADI-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g32284 | KAN4, ATS | KANADI-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01005342001 | No alias | RNA biosynthesis.transcriptional activation.MYB... | 0.06 | OrthoFinder output from all 47 species | |
GSVIVT01012707001 | No alias | No description available | 0.03 | OrthoFinder output from all 47 species | |
Gb_17469 | KAN, KAN1 | G2-like GARP transcription factor | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os02g07170.1 | LOC_Os02g07170 | G2-like GARP transcription factor | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os02g14490.1 | LOC_Os02g14490 | Putative Myb family transcription factor At1g14600... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os03g03760.1 | LOC_Os03g03760 | G2-like GARP transcription factor | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os08g33750.1 | LOC_Os08g33750 | G2-like GARP transcription factor | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os10g39550.1 | LOC_Os10g39550 | G2-like GARP transcription factor | 0.04 | OrthoFinder output from all 47 species | |
Lfl_g18619 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
MA_21538g0020 | No alias | G2-like GARP transcription factor | 0.02 | OrthoFinder output from all 47 species | |
MA_8183372g0010 | No alias | G2-like GARP transcription factor | 0.02 | OrthoFinder output from all 47 species | |
Msp_g25706 | No alias | transcription factor *(CLAUSA) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ore_g13957 | No alias | transcription factor *(CLAUSA) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pir_g29343 | KAN2 | KANADI-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pnu_g13922 | No alias | transcription factor *(CLAUSA) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pnu_g22623 | KAN4, ATS | KANADI-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sam_g04137 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sam_g06418 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sam_g12596 | No alias | transcription factor *(CLAUSA) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sam_g18448 | No alias | KANADI-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Smo405704 | KAN4, ATS | RNA biosynthesis.transcriptional activation.MYB... | 0.02 | OrthoFinder output from all 47 species | |
Solyc10g078720.2.1 | Solyc10g078720 | G2-like GARP transcription factor | 0.03 | OrthoFinder output from all 47 species | |
Solyc12g006280.3.1 | Solyc12g006280 | Putative Myb family transcription factor At1g14600... | 0.04 | OrthoFinder output from all 47 species | |
Solyc12g017370.3.1 | APL, WDY, Solyc12g017370 | G2-like GARP transcription factor | 0.03 | OrthoFinder output from all 47 species | |
Spa_g22698 | RD19A, RD19 | EC_3.4 hydrolase acting on peptide bond (peptidase) &... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e003093_P001 | KAN4, ATS, Zm00001e003093 | G2-like GARP transcription factor | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e005797_P001 | KAN4, ATS, Zm00001e005797 | G2-like GARP transcription factor | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e014339_P001 | Zm00001e014339 | Putative Myb family transcription factor At1g14600... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e015514_P001 | KAN2, Zm00001e015514 | G2-like GARP transcription factor | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e018018_P002 | KAN4, ATS, Zm00001e018018 | G2-like GARP transcription factor | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e037731_P001 | APL, WDY, Zm00001e037731 | G2-like GARP transcription factor | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e037761_P001 | Zm00001e037761 | G2-like GARP transcription factor | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e040203_P001 | KAN2, Zm00001e040203 | G2-like GARP transcription factor | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006508 | proteolysis | IEP | HCCA |
MF | GO:0008233 | peptidase activity | IEP | HCCA |
MF | GO:0008234 | cysteine-type peptidase activity | IEP | HCCA |
No InterPro domains available for this sequence
No external refs found! |